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Krt36 Gene Detail
Summary
  • Symbol
    Krt36
  • Name
    keratin 36
  • Synonyms
    HRa-1, keratin 5, Krt1-22, Krt1-5
  • Feature Type
    protein coding gene
  • IDs
    MGI:109364
    NCBI Gene: 16673
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:99992833-99996452 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 63.41 cM, cytoband D
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    186 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_109364
 protein coding gene Chr11:99992833-100000301 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019140
 protein coding gene Chr11:102849125-102852744 (-)
A/J MGP_AJ_G0019108
 protein coding gene Chr11:98508288-98511907 (-)
AKR/J MGP_AKRJ_G0019077
 protein coding gene Chr11:101552421-101556034 (-)
BALB/cJ MGP_BALBcJ_G0019082
 protein coding gene Chr11:99024664-99028283 (-)
C3H/HeJ MGP_C3HHeJ_G0018891
 protein coding gene Chr11:101748259-101751878 (-)
C57BL/6NJ MGP_C57BL6NJ_G0019531
 protein coding gene Chr11:106017971-106021590 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017158
 protein coding gene Chr11:95961446-95965069 (-)
CAST/EiJ MGP_CASTEiJ_G0018445
 protein coding gene Chr11:102730143-102733765 (-)
CBA/J MGP_CBAJ_G0018860
 protein coding gene Chr11:110452049-110455668 (-)
DBA/2J MGP_DBA2J_G0018973
 protein coding gene Chr11:98082697-98086316 (-)
FVB/NJ MGP_FVBNJ_G0018962
 protein coding gene Chr11:97583519-97587138 (-)
LP/J MGP_LPJ_G0019041
 protein coding gene Chr11:103388244-103391863 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0018993
 protein coding gene Chr11:110077196-110080815 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0019569
 protein coding gene Chr11:101930420-101934039 (-)
PWK/PhJ MGP_PWKPhJ_G0018208
 protein coding gene Chr11:99113607-99117224 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018000
 protein coding gene Chr11:101629959-101633580 (-)
WSB/EiJ MGP_WSBEiJ_G0018494
 protein coding gene Chr11:101897270-101900889 (-)



Homology
more
  • Human Ortholog
    KRT36, keratin 36
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    KRT36, keratin 36
  • Synonyms
    HA6, hHa6, KRTHA6
  • Links
    NCBI Gene ID: 8689
    neXtProt AC: NX_O76013
    UniProt: O76013

  • Chr Location
    17q21.2; chr17:41486136-41492546 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 1 allele in 1 genetic background
    10 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a knock-out allele exhibit hyperkeratosis affecting the scales of the tail skin and the filiform papillae of the tongue.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    9
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    732
  • Tissues
    15
  • cDNA Data
    8
  • Literature Summary
    6
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000020916 Ensembl Gene Model | MGI Sequence Detail 3620 C57BL/6J ±  kb
    transcript ENSMUST00000107416 Ensembl | MGI Sequence Detail 1671 Not Applicable  
    polypeptide ENSMUSP00000103039 Ensembl | MGI Sequence Detail 473 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 10
      cDNA 9
      Primer pair 1

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGD-MRK-38409
    References
    more
    • Summaries
      All 38
      Developmental Gene Expression 6
      Gene Ontology 4
      Phenotypes 10
    • Earliest
      J:2252 Tobiasch E, et al., Structural features and sites of expression of a new murine 65 kD and 48 kD hair-related keratin pair, associated with a special type of parakeratotic epithelial differentiation. Differentiation. 1992 Aug;50(3):163-78
    • Latest
      J:242196 Xu M, et al., WNT10A mutation causes ectodermal dysplasia by impairing progenitor cell proliferation and KLF4-mediated differentiation. Nat Commun. 2017 Jun 07;8:15397
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory