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Obp1a Gene Detail
Summary
  • Symbol
    Obp1a
  • Name
    odorant binding protein IA
  • Synonyms
    OBP-1a
  • Feature Type
    protein coding gene
  • IDs
    MGI:1277949
    NCBI Gene: 18249
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:77129111-77134980 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 38.33 cM, cytoband A7.1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    269 from dbSNP Build 142
  • Strain Annotations
    8
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1277949
 protein coding gene ChrX:77129111-77134980 (-)
129S1/SvImJ MGP_129S1SvImJ_G0035874
 protein coding gene ChrX:73934757-73942553 (-)
A/J no annotation
AKR/J no annotation
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0036372
 protein coding gene ChrX:76266396-76281368 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0035526
 protein coding gene ChrX:78306499-78315203 (-)
DBA/2J no annotation
FVB/NJ no annotation
LP/J MGP_LPJ_G0035769
 protein coding gene ChrX:74819181-74825571 (-)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0036398
 protein coding gene ChrX:73770765-73788986 (-)
PWK/PhJ MGP_PWKPhJ_G0034538
 protein coding gene ChrX:57747585-57751549 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0034978
 protein coding gene ChrX:72960150-72966728 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    6
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    10
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 18249 NCBI Gene Model | MGI Sequence Detail 5870 C57BL/6J ±  kb
transcript NM_008754 RefSeq | MGI Sequence Detail 757 C57BL/6  
polypeptide Q9D3H2 UniProt | EBI | MGI Sequence Detail 163 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 4
References
more
  • Summaries
    All 27
    Gene Ontology 5
    Phenotypes 1
  • Earliest
    J:48070 Pes D, et al., Cloning and expression of odorant-binding proteins Ia and Ib from mouse nasal tissue. Gene. 1998 May 28;212(1):49-55
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory