Gene Expression Data
Assay Details
Assay
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Reference:
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J:34587
Taneja R, et al., The expression pattern of the mouse receptor tyrosine kinase gene MDK1 is conserved through evolution and requires Hoxa-2 for rhombomere-specific expression in mouse embryos. Dev Biol. 1996 Aug 1;177(2):397-412
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:1338214
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Gene symbol:
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Epha7
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Gene name:
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Eph receptor A7
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Probe:
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MDK1 probe1
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Visualized with:
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Alkaline phosphatase
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Results
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Specimen
5. A:
embryonic day 7.0
(more )
Specimen
5. A:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 7.0
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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whole mount
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Specimen
5. B:
embryonic day 7.5
(more )
Specimen
5. B:
(close )
Genetic Background:
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Not Specified
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Age:
|
embryonic day 7.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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whole mount
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Structure |
Level |
Pattern |
Image |
Note |
TS11: embryo ectoderm |
Present |
Regionally restricted |
5B
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Expression detected in the rostral part of the headfolds and subadjacent mesoderm, the caudal regions of the headfolds, the most lateral regions of the mesoderm.
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TS11: embryo mesoderm |
Present |
Regionally restricted |
5B
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Expression detected in the rostral part of the headfolds and subadjacent mesoderm, the caudal regions of the headfolds, the most lateral regions of the mesoderm.
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TS11: future brain |
Present |
Regionally restricted |
5B
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Expression detected in the rostral part of the headfolds and subadjacent mesoderm, the caudal regions of the headfolds, the most lateral regions of the mesoderm.
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TS11: primitive streak |
Absent |
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5B
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Expression was also absent in the mesoderm adjacent to the primitive streak.
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Specimen
5. C:
embryonic day 7.5
(more )
Specimen
5. C:
(close )
Genetic Background:
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Not Specified
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Age:
|
embryonic day 7.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Structure |
Level |
Pattern |
Image |
Note |
TS11: embryo mesoderm |
Present |
Regionally restricted |
5C
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Expression detected in rostral portion of neural groove neurectoderm and subadjacent mesoderm.
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TS11: future brain neural fold |
Present |
Regionally restricted |
5C
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Expression detected in rostral portion of neural groove neurectoderm and subadjacent mesoderm.
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Specimen
5. D:
embryonic day 7.5
(more )
Specimen
5. D:
(close )
Genetic Background:
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Not Specified
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Age:
|
embryonic day 7.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Structure |
Level |
Pattern |
Image |
Note |
TS11: embryo mesoderm |
Present |
Regionally restricted |
5D
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Expression detected in the caudal regions of the headfolds and the most lateral regions of the mesoderm.
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TS11: future brain neural fold |
Present |
Regionally restricted |
5D
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Expression detected in the caudal regions of the headfolds and the most lateral regions of the mesoderm.
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TS11: primitive streak |
Absent |
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5D
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Expression was also absent in the mesoderm adjacent to the primitive streak.
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Specimen
5. E:
embryonic day 7.5
(more )
Specimen
5. E:
(close )
Genetic Background:
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Not Specified
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Age:
|
embryonic day 7.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Structure |
Level |
Pattern |
Image |
Note |
TS11: embryo mesoderm |
Present |
Regionally restricted |
5E
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Expression detected in the caudal regions of the headfolds and the most lateral regions of the mesoderm.
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TS11: future brain neural fold |
Present |
Regionally restricted |
5E
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Expression detected in the caudal regions of the headfolds and the most lateral regions of the mesoderm.
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TS11: primitive streak |
Absent |
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5E
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Expression was also absent in the mesoderm adjacent to the primitive streak.
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Specimen
6. A:
embryonic day 8.5
(more )
Note: 2-3 somite embryo.
Specimen
6. A:
(close )
Genetic Background:
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Not Specified
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Age:
|
embryonic day 8.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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2-3 somite embryo.
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Specimen
6. B:
embryonic day 8.5
(more )
Note: 6 somite embryo.
Specimen
6. B:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 8.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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6 somite embryo.
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Specimen
6. C:
embryonic day 8.5
(more )
Note: 8-10 somite embryo.
Specimen
6. C:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 8.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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8-10 somite embryo.
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Structure |
Level |
Pattern |
Image |
Note |
TS13: rhombomere 2 |
Present |
Uniform |
6C
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TS13: rhombomere 5 |
Present |
Uniform |
6C
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TS13: rhombomere 4 |
Present |
Uniform |
6C
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Expression in R4 is higher than in R5.
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TS13: rhombomere 3 |
Strong |
Uniform |
6C
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TS13: head somite |
Present |
Regionally restricted |
6C
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Expression was detected in all somites except the two to three caudal pairs that were the most recent to segregate. Expression was restricted to the most dorsal part of the somites.
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TS13: trunk somite |
Present |
Regionally restricted |
6C
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Expression was detected in all somites except the two to three caudal pairs that were the most recent to segregate. Expression was restricted to the most dorsal part of the somites.
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Specimen
6. D:
embryonic day 9.5
(more )
Note: 20 somite embryo.
Specimen
6. D:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 9.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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20 somite embryo.
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Specimen
6. E:
embryonic day 9.5
(more )
Note: 17-18 somite embryo.
Specimen
6. E:
(close )
Genetic Background:
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Not Specified
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Age:
|
embryonic day 9.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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17-18 somite embryo.
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Structure |
Level |
Pattern |
Image |
Note |
TS14: rhombomere 2 |
Strong |
Uniform |
6E
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TS14: rhombomere 3 |
Strong |
Uniform |
6E
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TS14: rhombomere 5 |
Strong |
Uniform |
6E
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TS14: rhombomere 4 |
Present |
Uniform |
6E
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TS14: rhombomere 6 |
Present |
Uniform |
6E
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TS14: head somite |
Present |
Regionally restricted |
6E
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Expression was detected in all somites except the two to three caudal pairs that were the most recent to segregate. Expression was restricted to the most dorsal part of the somites. Expression detected in the otic vesicle.
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TS14: inner ear |
Present |
Regionally restricted |
6E
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Expression was detected in all somites except the two to three caudal pairs that were the most recent to segregate. Expression was restricted to the most dorsal part of the somites. Expression detected in the otic vesicle.
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TS14: trunk somite |
Present |
Regionally restricted |
6E
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Expression was detected in all somites except the two to three caudal pairs that were the most recent to segregate. Expression was restricted to the most dorsal part of the somites. Expression detected in the otic vesicle.
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Specimen
6. F:
embryonic day 8.5
(more )
Note: 8-9 somite embryo.
Specimen
6. F:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 8.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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8-9 somite embryo.
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Specimen
6. H:
embryonic day 8.5
(more )
Note: 8-9 somite embryo.
Specimen
6. H:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 8.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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whole mount
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Note:
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8-9 somite embryo.
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Structure |
Level |
Pattern |
Image |
Note |
TS13: rhombomere 3 |
Strong |
Uniform |
6H
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Specimen was double hydridized with Egr2 and Epha7 probes and expression was inferred from previous specimens.
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TS13: rhombomere 5 |
Weak |
Uniform |
6H
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Specimen was double hydridized with Egr2 and Epha7 probes and expression was inferred from previous specimens.
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Specimen
7. A:
embryonic day 9.5
(more )
Specimen
7. A:
(close )
Genetic Background:
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Not Specified
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Age:
|
embryonic day 9.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Structure |
Level |
Pattern |
Image |
Note |
TS15: rhombomere |
Strong |
Regionally restricted |
7A
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Signal was maximal along the dorsal edges of the rhombomeres and extends more ventrally in cells of the ventricular layer.
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Specimen
7. B:
embryonic day 9.5
(more )
Specimen
7. B:
(close )
Genetic Background:
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Not Specified
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Age:
|
embryonic day 9.5
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Age Note:
|
Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Structure |
Level |
Pattern |
Image |
Note |
TS15: rhombomere |
Strong |
Regionally restricted |
7B
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Signal was maximal along the dorsal edges of the rhombomeres and extends more ventrally in cells of the ventricular layer.
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TS15: inner ear |
Present |
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7B
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Specimen
7. C:
embryonic day 9.5
(more )
Specimen
7. C:
(close )
Genetic Background:
|
Not Specified
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Age:
|
embryonic day 9.5
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Age Note:
|
Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Embedding:
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Paraffin
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Structure |
Level |
Pattern |
Image |
Note |
TS15: trunk somite |
Present |
Regionally restricted |
7C
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Expression is detected in the dorsal part of differentiating somites and the boundary between the dermatome and myotome in rostral somites.
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Specimen
7. D:
embryonic day 9.5
(more )
Specimen
7. D:
(close )
Genetic Background:
|
Not Specified
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Age:
|
embryonic day 9.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
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Not Specified
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Type:
|
section
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Embedding:
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Paraffin
|
Structure |
Level |
Pattern |
Image |
Note |
TS15: trunk somite |
Present |
Regionally restricted |
7D
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Expression is detected in the boundary between the dermatome and myotome in rostral somites.
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Specimen
7. E:
embryonic day 9.5
(more )
Specimen
7. E:
(close )
Genetic Background:
|
Not Specified
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Age:
|
embryonic day 9.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
|
section
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Embedding:
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Paraffin
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Structure |
Level |
Pattern |
Image |
Note |
TS15: trunk somite |
Present |
Regionally restricted |
7E
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Expression is detected in the dorsal edge of the dermomyotome.
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Specimen
8. B:
embryonic day 8.5
(more )
Specimen
8. B:
(close )
Genetic Background:
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Not Specified
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Age:
|
embryonic day 8.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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whole mount
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Structure |
Level |
Pattern |
Image |
Note |
TS13: future midbrain |
Present |
Regionally restricted |
8B
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Expression is detected in two dorsal domains; from the midbrain-forebrain junction to the optic vesicles and at the base of the optic vesicles.
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TS13: future prosencephalon |
Present |
Regionally restricted |
8B
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Expression is detected in two dorsal domains; from the midbrain-forebrain junction to the optic vesicles and at the base of the optic vesicles.
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Specimen
8. C:
embryonic day 9.5
(more )
Specimen
8. C:
(close )
Genetic Background:
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Not Specified
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Age:
|
embryonic day 9.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
|
Not Specified
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Type:
|
whole mount
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Specimen
9. B:
embryonic day 8.5
(more )
Specimen
9. B:
(close )
Genetic Background:
|
Not Specified
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Age:
|
embryonic day 8.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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whole mount
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Specimen
9. C:
(close )
Genetic Background:
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Not Specified
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Mutant Allele(s):
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Hoxa2tm1Grid/Hoxa2tm1Grid
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Age:
|
embryonic day 8.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
|
Not Specified
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Type:
|
whole mount
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Specimen
9. D:
embryonic day 8.75
(more )
Specimen
9. D:
(close )
Genetic Background:
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Not Specified
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Age:
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embryonic day 8.75
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
|
whole mount
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Specimen
9. E:
(close )
Genetic Background:
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Not Specified
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Mutant Allele(s):
|
Hoxa2tm1Grid/Hoxa2tm1Grid
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Age:
|
embryonic day 8.75
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
|
Not Specified
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Type:
|
whole mount
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Specimen
9. F:
embryonic day 9.0
(more )
Specimen
9. F:
(close )
Genetic Background:
|
Not Specified
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Age:
|
embryonic day 9.0
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
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Type:
|
whole mount
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Specimen
9. G:
(close )
Genetic Background:
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Not Specified
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Mutant Allele(s):
|
Hoxa2tm1Grid/Hoxa2tm1Grid
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Age:
|
embryonic day 9.0
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
|
Sex:
|
Not Specified
|
Type:
|
whole mount
|
Specimen
8. A:
embryonic day 8.5
(more )
Specimen
8. A:
(close )
Genetic Background:
|
Not Specified
|
Age:
|
embryonic day 8.5
|
Age Note:
|
Age of embryo at noon of plug day not specified in reference.
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Sex:
|
Not Specified
|
Type:
|
whole mount
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