Gene Expression Data
Assay Details
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Assay
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Reference:
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J:11921
Sasaki H, et al., Differential expression of multiple fork head related genes during gastrulation and axial pattern formation in the mouse embryo. Development. 1993 May;118(1):47-59
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:1338957
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Gene symbol:
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Foxa2
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Gene name:
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forkhead box A2
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Probe:
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c21
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Probe preparation:
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Antisense labelled with digoxigenin RNA
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Visualized with:
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Alkaline phosphatase
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Results
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Specimen
2. A:
embryonic day 7.0
(more  )
Note: The embryo is mid-late streak stage.
Specimen
2. A:
(close  )
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Genetic Background:
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(ICR x Swiss Webster)F1
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Age:
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embryonic day 7.0
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Note:
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The embryo is mid-late streak stage.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS10: primitive streak |
Present |
Regionally restricted |
2A
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Expression is detected in the anterior part of the primitive streak.
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Specimen
2. B:
embryonic day 7.0
(more )
Note: The embryo is mid-late streak stage. Specimen 2. B is a section of the whole-mount 2. A.
Specimen
2. B:
(close )
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Genetic Background:
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(ICR x Swiss Webster)F1
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Age:
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embryonic day 7.0
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Sex:
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Not Specified
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Type:
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section from whole mount
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Note:
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The embryo is mid-late streak stage. Specimen 2. B is a section of the whole-mount 2. A.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS10: embryo |
Present |
Regionally restricted |
2B
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Expression is detected in delaminating epiblast cells.
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Specimen
2. C:
embryonic day 7.5
(more )
Note: The embryo is early headfold stage.
Specimen
2. C:
(close )
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Genetic Background:
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(ICR x Swiss Webster)F1
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Age:
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embryonic day 7.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Note:
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The embryo is early headfold stage.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS11: future spinal cord neural plate |
Present |
Regionally restricted |
2C
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Expression extends anteriorly from node along anterior midline in the notochord and overlying neural plate.
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| TS11: node |
Present |
Regionally restricted |
2C
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Expression extends anteriorly from node along anterior midline in the notochord and overlying neural plate.
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| TS11: notochordal plate |
Present |
Regionally restricted |
2C
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Expression extends anteriorly from node along anterior midline in the notochord and overlying neural plate.
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Specimen
2. D, E:
embryonic day 8.0
(more )
Note: 3-somite stage embryo. Specimens 2. D and 2. E are lateral and anterior views of the same embryo.
Specimen
2. D, E:
(close )
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Genetic Background:
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(ICR x Swiss Webster)F1
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Age:
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embryonic day 8.0
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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Note:
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3-somite stage embryo. Specimens 2. D and 2. E are lateral and anterior views of the same embryo.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS12: future spinal cord neural plate |
Present |
Regionally restricted |
2D
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2E
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Expression extends anteriorly from node along anterior midline in the notochord and overlying neural plate.
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| TS12: notochord |
Present |
Regionally restricted |
2D
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2E
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Expression extends anteriorly from node along anterior midline in the notochord and overlying neural plate.
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| TS12: primitive streak |
Present |
Regionally restricted |
2D
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2E
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Expression extends anteriorly from node along anterior midline in the notochord and overlying neural plate.
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| TS12: foregut diverticulum |
Present |
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2D
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2E
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Specimen
2. F:
embryonic day 8.0
(more )
Note: 3-somite stage embryo.
Specimen
2. F:
(close )
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Genetic Background:
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(ICR x Swiss Webster)F1
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Age:
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embryonic day 8.0
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Sex:
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Not Specified
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Type:
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section from whole mount
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Note:
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3-somite stage embryo.
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| Structure |
Level |
Pattern |
Image |
Note |
| TS12: future spinal cord neural plate |
Present |
Regionally restricted |
2F
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Expression extends anteriorly from node along anterior midline in the notochord and overlying neural plate.
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| TS12: notochord |
Present |
Regionally restricted |
2F
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Expression extends anteriorly from node along anterior midline in the notochord and overlying neural plate.
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| TS12: primitive streak |
Present |
Regionally restricted |
2F
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Expression extends anteriorly from node along anterior midline in the notochord and overlying neural plate.
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| TS12: neural tube floor plate |
Present |
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2F
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Specimen
3. A, B:
embryonic day 8.5
(more )
Specimen
3. A, B:
(close )
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Genetic Background:
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(ICR x Swiss Webster)F1
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Age:
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embryonic day 8.5
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS13: future hindbrain |
Present |
Regionally restricted |
3B
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3A
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Expression is detected in the ventral midline of the neural tube, anterior limit of expression is in the midbrain.
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| TS13: future midbrain |
Present |
Regionally restricted |
3B
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3A
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Expression is detected in the ventral midline of the neural tube, anterior limit of expression is in the midbrain.
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| TS13: neural tube |
Present |
Regionally restricted |
3B
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3A
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Expression is detected in the ventral midline of the neural tube, anterior limit of expression is in the midbrain.
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| TS13: foregut diverticulum |
Present |
Regionally restricted |
3B
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3A
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Expression is higher in the anterior and posterior then the middle of the gut.
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| TS13: hindgut diverticulum |
Present |
Regionally restricted |
3B
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3A
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Expression is higher in the anterior and posterior then the middle of the gut.
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Specimen
3. C:
embryonic day 9.0
(more )
Specimen
3. C:
(close )
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Genetic Background:
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(ICR x Swiss Webster)F1
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Age:
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embryonic day 9.0
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Sex:
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Not Specified
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Type:
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whole mount
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Fixation:
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4% Paraformaldehyde
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| Structure |
Level |
Pattern |
Image |
Note |
| TS14: future hindbrain |
Present |
Regionally restricted |
3C
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Expression is detected in the ventral midline of the neural tube, anterior limit of expression is in the midbrain.
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| TS14: future midbrain |
Present |
Regionally restricted |
3C
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Expression is detected in the ventral midline of the neural tube, anterior limit of expression is in the midbrain.
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| TS14: neural tube |
Present |
Regionally restricted |
3C
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Expression is detected in the ventral midline of the neural tube, anterior limit of expression is in the midbrain.
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| TS14: visceral organ system |
Present |
Regionally restricted |
3C
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Expression is detected in the liver primordium.
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| TS14: foregut |
Present |
Regionally restricted |
3C
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Expression is higher in the anterior and posterior then the middle of the gut.
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| TS14: hindgut diverticulum |
Present |
Regionally restricted |
3C
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Expression is higher in the anterior and posterior then the middle of the gut.
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Specimen
3. D:
embryonic day 8.5
(more )
Specimen
3. D:
(close )
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Genetic Background:
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(ICR x Swiss Webster)F1
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Age:
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embryonic day 8.5
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Sex:
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Not Specified
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Type:
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section from whole mount
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
3. E:
embryonic day 9.0
(more )
Specimen
3. E:
(close )
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Genetic Background:
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(ICR x Swiss Webster)F1
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Age:
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embryonic day 9.0
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Sex:
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Not Specified
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Type:
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section from whole mount
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS14: future hindbrain |
Present |
Regionally restricted |
3E
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Expression is detected in the ventral midline.
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| TS14: notochord |
Present |
Regionally restricted |
3E
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Expression is detected in the ventral midline.
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| TS14: future midbrain |
Present |
Regionally restricted |
3E
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Expression is detected in lateral midbrain and is not restricted to ventral midline.
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Specimen
3. F:
embryonic day 9.0
(more )
Specimen
3. F:
(close )
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Genetic Background:
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(ICR x Swiss Webster)F1
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Age:
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embryonic day 9.0
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Sex:
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Not Specified
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Type:
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section from whole mount
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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Specimen
3. G:
embryonic day 9.0
(more )
Specimen
3. G:
(close )
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Genetic Background:
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(ICR x Swiss Webster)F1
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Age:
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embryonic day 9.0
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Sex:
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Not Specified
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Type:
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section from whole mount
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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