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Lamc3 Gene Detail
Summary
  • Symbol
    Lamc3
  • Name
    laminin gamma 3
  • Feature Type
    protein coding gene
  • IDs
    MGI:1344394
    NCBI Gene: 23928
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:31777303-31836551 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 21.93 cM, cytoband B
  • Mapping Data
    3 experiments
Strain
Comparison
more
  • SNPs within 2kb
    1529 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1344394
 protein coding gene Chr2:31777293-31839095 (+)
129S1/SvImJ MGP_129S1SvImJ_G0025592
 protein coding gene Chr2:30276345-30340966 (+)
A/J MGP_AJ_G0025570
 protein coding gene Chr2:29019493-29082775 (+)
AKR/J MGP_AKRJ_G0025539
 protein coding gene Chr2:30015798-30080084 (+)
BALB/cJ MGP_BALBcJ_G0025566
 protein coding gene Chr2:29143808-29206243 (+)
C3H/HeJ MGP_C3HHeJ_G0025327
 protein coding gene Chr2:29930689-30001478 (+)
C57BL/6NJ MGP_C57BL6NJ_G0026011
 protein coding gene Chr2:31225682-31291124 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0023419
 protein coding gene Chr2:27760115-27820815 (+)
CAST/EiJ MGP_CASTEiJ_G0024789
 protein coding gene Chr2:29877043-29943051 (+)
CBA/J MGP_CBAJ_G0025304
 protein coding gene Chr2:32355238-32442910 (+)
DBA/2J MGP_DBA2J_G0025437
 protein coding gene Chr2:28794139-28852407 (+)
FVB/NJ MGP_FVBNJ_G0025400
 protein coding gene Chr2:28644219-28704886 (+)
LP/J MGP_LPJ_G0025523
 protein coding gene Chr2:30150888-30218277 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0025430
 protein coding gene Chr2:32084147-32149471 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0026069
 protein coding gene Chr2:29932214-29997119 (+)
PWK/PhJ MGP_PWKPhJ_G0024536
 protein coding gene Chr2:28682671-28744134 (+)
SPRET/EiJ MGP_SPRETEiJ_G0024336
 protein coding gene Chr2:30071493-30138009 (+)
WSB/EiJ MGP_WSBEiJ_G0024857
 protein coding gene Chr2:30106852-30172427 (+)



Homology
more
  • Human Ortholog
    LAMC3, laminin subunit gamma 3
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    LAMC3, laminin subunit gamma 3
  • Synonyms
    OCCM
  • Links
    NCBI Gene ID: 10319
    neXtProt AC: NX_Q9Y6N6
    UniProt: Q9Y6N6

  • Chr Location
    9q34.12; chr9:131009174-131094473 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotypes from 2 alleles in 2 genetic backgrounds
    6 phenotypes from multigenic genotypes
    14 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Mice homozygous for a reporter allele exhibit abnormal amacrine cell morphology.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    10
  • GO References
    4
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    930
  • Tissues
    124
  • cDNA Data
    30
  • Literature Summary
    22
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000026840 Ensembl Gene Model | MGI Sequence Detail 59249 C57BL/6J ±  kb
transcript ENSMUST00000028187 Ensembl | MGI Sequence Detail 5871 Not Applicable  
polypeptide ENSMUSP00000028187 Ensembl | MGI Sequence Detail 1581 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 37
    Genomic 1
    cDNA 31
    Primer pair 4
    Other 1

    Microarray probesets 4
Other
Accession IDs
less
MGI:2139003, MGI:2139333
References
more
  • Summaries
    All 64
    Developmental Gene Expression 22
    Gene Ontology 4
    Phenotypes 14
  • Earliest
    J:54919 Iivanainen A, et al., Molecular cloning and tissue-specific expression of a novel murine laminin gamma3 chain. J Biol Chem. 1999 May 14;274(20):14107-11
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory