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Zdhhc6 Gene Detail
Summary
  • Symbol
    Zdhhc6
  • Name
    zinc finger, DHHC domain containing 6
  • Synonyms
    5930409M18Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914230
    NCBI Gene: 66980
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr19:55286648-55304468 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 19, 51.33 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    486 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914230
 protein coding gene Chr19:55259723-55304468 (-)
129S1/SvImJ MGP_129S1SvImJ_G0025258
 protein coding gene Chr19:55566276-55584016 (-)
A/J MGP_AJ_G0025234
 protein coding gene Chr19:52838619-52856332 (-)
AKR/J MGP_AKRJ_G0025203
 protein coding gene Chr19:54504617-54524448 (-)
BALB/cJ MGP_BALBcJ_G0025229
 protein coding gene Chr19:52909104-52926830 (-)
C3H/HeJ MGP_C3HHeJ_G0024989
 protein coding gene Chr19:54728953-54748996 (-)
C57BL/6NJ MGP_C57BL6NJ_G0025672
 protein coding gene Chr19:56935214-56954574 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023084
 protein coding gene Chr19:51766671-51784592 (-)
CAST/EiJ MGP_CASTEiJ_G0024454
 protein coding gene Chr19:54722910-54741448 (-)
CBA/J MGP_CBAJ_G0024969
 protein coding gene Chr19:59737416-59755215 (-)
DBA/2J MGP_DBA2J_G0025101
 protein coding gene Chr19:52633187-52650866 (-)
FVB/NJ MGP_FVBNJ_G0025062
 protein coding gene Chr19:52336545-52354261 (-)
LP/J MGP_LPJ_G0025187
 protein coding gene Chr19:55441068-55459069 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025095
 protein coding gene Chr19:59101501-59119793 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0025730
 protein coding gene Chr19:54717086-54735671 (-)
PWK/PhJ MGP_PWKPhJ_G0024202
 protein coding gene Chr19:52564339-52582782 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024005
 protein coding gene Chr19:53384490-53402114 (-)
WSB/EiJ MGP_WSBEiJ_G0024524
 protein coding gene Chr19:54835252-54853106 (-)



Homology
more
  • Human Ortholog
    ZDHHC6, zinc finger DHHC-type palmitoyltransferase 6
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ZDHHC6, zinc finger DHHC-type palmitoyltransferase 6
  • Synonyms
    DHHC-6, DHHC6, ZNF376
  • Links
    NCBI Gene ID: 64429
    neXtProt AC: NX_Q9H6R6
    UniProt: Q9H6R6

  • Chr Location
    10q25.2; chr10:112424412-112447572 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    20
  • GO References
    8
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    829
  • Tissues
    123
  • cDNA Data
    96
  • Literature Summary
    8
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 66980 NCBI Gene Model | MGI Sequence Detail 17821 C57BL/6J ±  kb
transcript NM_001033573 RefSeq | MGI Sequence Detail 2373 C57BL/6  
polypeptide Q9CPV7 UniProt | EBI | MGI Sequence Detail 413 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 98
    cDNA 97
    Primer pair 1

    Microarray probesets 9
Other
Accession IDs
less
MGI:1924391, MGI:2147552, MGI:2147778
References
more
  • Summaries
    All 45
    Developmental Gene Expression 8
    Gene Ontology 8
    Phenotypes 6
  • Earliest
    J:60984 Ko MS, et al., Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Development. 2000 Apr;127(8):1737-49
  • Latest
    J:347882 Yu T, et al., NLRP3 Cys126 palmitoylation by ZDHHC7 promotes inflammasome activation. Cell Rep. 2024 Apr 23;43(4):114070
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory