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Tmem35a Gene Detail
Summary
  • Symbol
    Tmem35a
  • Name
    transmembrane protein 35A
  • Synonyms
    9030603L14Rik, NACHO, Tmem35
  • Feature Type
    protein coding gene
  • IDs
    MGI:1914814
    NCBI Gene: 67564
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:133195974-133206718 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 56.06 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    211 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1914814
 protein coding gene ChrX:133195974-133206718 (+)
129S1/SvImJ MGP_129S1SvImJ_G0036065
 protein coding gene ChrX:131467472-131479073 (+)
A/J MGP_AJ_G0036047
 protein coding gene ChrX:130882750-130894340 (+)
AKR/J MGP_AKRJ_G0035966
 protein coding gene ChrX:135083899-135094418 (+)
BALB/cJ MGP_BALBcJ_G0036038
 protein coding gene ChrX:129319887-129330871 (+)
C3H/HeJ MGP_C3HHeJ_G0035742
 protein coding gene ChrX:131538456-131549126 (+)
C57BL/6NJ MGP_C57BL6NJ_G0036560
 protein coding gene ChrX:135336223-135347504 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0033388
 protein coding gene ChrX:123071996-123082695 (+)
CAST/EiJ MGP_CASTEiJ_G0035029
 protein coding gene ChrX:112412412-112424136 (+)
CBA/J MGP_CBAJ_G0035719
 protein coding gene ChrX:139393980-139407216 (+)
DBA/2J MGP_DBA2J_G0035872
 protein coding gene ChrX:130208402-130218989 (+)
FVB/NJ MGP_FVBNJ_G0035814
 protein coding gene ChrX:129526270-129537261 (+)
LP/J MGP_LPJ_G0035965
 protein coding gene ChrX:132339554-132350854 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035842
 protein coding gene ChrX:146771738-146783557 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0036589
 protein coding gene ChrX:130891880-130903561 (+)
PWK/PhJ MGP_PWKPhJ_G0034721
 protein coding gene ChrX:109361305-109372566 (+)
SPRET/EiJ MGP_SPRETEiJ_G0034553
 protein coding gene ChrX:113048376-113058933 (+)
WSB/EiJ MGP_WSBEiJ_G0035166
 protein coding gene ChrX:129268287-129278910 (+)



Homology
more
  • Human Ortholog
    TMEM35A, transmembrane protein 35A
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    TMEM35A, transmembrane protein 35A
  • Synonyms
    NACHO, TMEM35, TUF-1
  • Links
    NCBI Gene ID: 59353
    neXtProt AC: NX_Q53FP2
    UniProt: Q53FP2

  • Chr Location
    Xq22.1; chrX:101078879-101096367 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    14 phenotypes from 1 allele in 1 genetic background
    13 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Knockout causes a reduction in hippocampal long-term potentiation, which results in impairment of fear learning and long-term spatial reference memory.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    21
  • GO References
    9
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    908
  • Tissues
    38
  • cDNA Data
    16
  • Literature Summary
    5
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic 67564 NCBI Gene Model | MGI Sequence Detail 10745 C57BL/6J ±  kb
    transcript NM_026239 RefSeq | MGI Sequence Detail 1979 Not Specified  
    polypeptide Q9D328 UniProt | EBI | MGI Sequence Detail 167 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 19
      cDNA 17
      Other 2

      Microarray probesets 3
    Other
    Accession IDs
    less
    MGI:2147917
    References
    more
    • Summaries
      All 42
      Developmental Gene Expression 5
      Gene Ontology 9
      Phenotypes 13
    • Earliest
      J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
    • Latest
      J:313619 Bedogni F, et al., Cell-Type-Specific Gene Expression in Developing Mouse Neocortex: Intermediate Progenitors Implicated in Axon Development. Front Mol Neurosci. 2021;14:686034
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory