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Snrpg Gene Detail
Summary
  • Symbol
    Snrpg
  • Name
    small nuclear ribonucleoprotein polypeptide G
  • Synonyms
    SMG
  • Feature Type
    protein coding gene
  • IDs
    MGI:1915261
    NCBI Gene: 68011
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:86348522-86355884 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 37.69 cM, cytoband B1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    278 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1915261
 protein coding gene Chr6:86348286-86356310 (+)
129S1/SvImJ MGP_129S1SvImJ_G0030973
 protein coding gene Chr6:87649434-87657544 (+)
A/J MGP_AJ_G0030939
 protein coding gene Chr6:84270481-84278499 (+)
AKR/J MGP_AKRJ_G0030870
 protein coding gene Chr6:86707808-86715836 (+)
BALB/cJ MGP_BALBcJ_G0030952
 protein coding gene Chr6:84281032-84289091 (+)
C3H/HeJ MGP_C3HHeJ_G0030758
 protein coding gene Chr6:97738867-97746958 (-)
C57BL/6NJ MGP_C57BL6NJ_G0031409
 protein coding gene Chr6:90027951-90039143 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0028593
 protein coding gene Chr6:82444804-82452406 (+)
CAST/EiJ MGP_CASTEiJ_G0030061
 protein coding gene Chr6:86779421-86788206 (+)
CBA/J MGP_CBAJ_G0030636
 protein coding gene Chr6:93573661-93581712 (+)
DBA/2J MGP_DBA2J_G0030792
 protein coding gene Chr6:83588544-83596575 (+)
FVB/NJ MGP_FVBNJ_G0030745
 protein coding gene Chr6:82771878-82781079 (+)
LP/J MGP_LPJ_G0030869
 protein coding gene Chr6:87686750-87695643 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0030778
 protein coding gene Chr6:97706341-97715439 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0031436
 protein coding gene Chr6:86557557-86565726 (+)
PWK/PhJ MGP_PWKPhJ_G0029776
 protein coding gene Chr6:82531182-82539371 (+)
SPRET/EiJ MGP_SPRETEiJ_G0029604
 protein coding gene Chr6:85394350-85402360 (+)
WSB/EiJ MGP_WSBEiJ_G0030142
 protein coding gene Chr6:87008512-87016551 (+)



Homology
more
  • Human Ortholog
    SNRPG, small nuclear ribonucleoprotein polypeptide G
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SNRPG, small nuclear ribonucleoprotein polypeptide G
  • Synonyms
    Sm-G, SMG
  • Links
    NCBI Gene ID: 6637
    neXtProt AC: NX_P62308
    UniProt: P62308

  • Chr Location
    2p13.3; chr2:70281362-70293740 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    50
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    764
  • Tissues
    36
  • cDNA Data
    78
  • Literature Summary
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 68011 NCBI Gene Model | MGI Sequence Detail 7363 C57BL/6J ±  kb
transcript NM_026506 RefSeq | MGI Sequence Detail 393 C57BL/6  
polypeptide P62309 UniProt | EBI | MGI Sequence Detail 76 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 82
    cDNA 79
    Primer pair 3

    Microarray probesets 4
References
more
  • Summaries
    All 36
    Developmental Gene Expression 3
    Gene Ontology 6
    Phenotypes 9
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:342644 Tscherner AK, et al., Relationship of quantitative reverse transcription polymerase chain reaction (RT-PCR) to RNA Sequencing (RNAseq) transcriptome identifies mouse preimplantation embryo reference genes. Biol Reprod. 2023 Nov 15;109(5):601-617
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory