2310016D03Rik MGI Mouse Gene Detail - MGI:1916816

Sequence Map

Chr12:30460558-30517357 bp, - strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_1916816	lncRNA gene	Chr12:30445811-30517400 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0005351	lincRNA gene	Chr12:28297459-28352819 (-)
A/J	MGP_AJ_G0005334	lincRNA gene	Chr12:27519567-27575570 (-)
AKR/J	MGP_AKRJ_G0005314	lincRNA gene	Chr12:28414515-28473308 (-)
BALB/cJ	MGP_BALBcJ_G0005316	lincRNA gene	Chr12:27774749-27827399 (-)
C3H/HeJ	MGP_C3HHeJ_G0005265	lincRNA gene	Chr12:28269672-28325899 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0005470	lincRNA gene	Chr12:29203673-29260092 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004857	lincRNA gene	Chr12:26852912-26909377 (-)
CAST/EiJ	MGP_CASTEiJ_G0005212	lincRNA gene	Chr12:23276985-23330989 (-)
CBA/J	MGP_CBAJ_G0005254	lincRNA gene	Chr12:30136804-30196568 (-)
DBA/2J	MGP_DBA2J_G0005272	lincRNA gene	Chr12:27361819-27418065 (-)
FVB/NJ	MGP_FVBNJ_G0005297	lincRNA gene	Chr12:27172787-27228801 (-)
LP/J	MGP_LPJ_G0005353	lincRNA gene	Chr12:28399350-28456920 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005279	lincRNA gene	Chr12:29763677-29824846 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005472	lincRNA gene	Chr12:27949017-28005993 (-)
PWK/PhJ	MGP_PWKPhJ_G0005161	lincRNA gene	Chr12:22092833-22153283 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0005081	lincRNA gene	Chr12:22562390-22625612 (-)
WSB/EiJ	MGP_WSBEiJ_G0005260	lincRNA gene	Chr12:28166863-28228329 (-)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	69566	NCBI Gene Model \| MGI Sequence Detail	56800	C57BL/6J	± kb
	transcript	NR_045491	RefSeq \| MGI Sequence Detail	1547	ZRU/MplStud

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Summaries

All 8
Earliest

J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
Latest

J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573

TSS for 2310016D03Rik:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr116033	Chr12:30517390-30517400 (-)	-38 bp

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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