About   Help   FAQ
Sntg1 Gene Detail
Summary
  • Symbol
    Sntg1
  • Name
    syntrophin, gamma 1
  • Synonyms
    G1SYN, SYN4
  • Feature Type
    protein coding gene
  • IDs
    MGI:1918346
    NCBI Gene: 71096
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:8431699-9370103 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 2.08 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    28838 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1918346
 protein coding gene Chr1:8429963-9371882 (-)
129S1/SvImJ MGP_129S1SvImJ_G0015822
 protein coding gene Chr1:5601170-6501939 (-)
A/J MGP_AJ_G0015804
 protein coding gene Chr1:5621284-6592779 (-)
AKR/J MGP_AKRJ_G0015763
 protein coding gene Chr1:5515088-6457158 (-)
BALB/cJ MGP_BALBcJ_G0015760
 protein coding gene Chr1:5382386-6333122 (-)
C3H/HeJ MGP_C3HHeJ_G0015594
 protein coding gene Chr1:5415978-6406451 (-)
C57BL/6NJ MGP_C57BL6NJ_G0016213
 protein coding gene Chr1:5822197-6828043 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0013934
 protein coding gene Chr1:4642799-5476481 (-)
CAST/EiJ MGP_CASTEiJ_G0015174
 protein coding gene Chr1:5667707-6568329 (-)
CBA/J MGP_CBAJ_G0015567
 protein coding gene Chr1:5935711-6985692 (-)
DBA/2J MGP_DBA2J_G0015666
 protein coding gene Chr1:5302454-6224644 (-)
FVB/NJ MGP_FVBNJ_G0015671
 protein coding gene Chr1:5232626-6155291 (-)
LP/J MGP_LPJ_G0015739
 protein coding gene Chr1:5734227-6724231 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0015690
 protein coding gene Chr1:6416665-7569902 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0016259
 protein coding gene Chr1:5417144-6370899 (-)
PWK/PhJ MGP_PWKPhJ_G0014958
 protein coding gene Chr1:5159607-6078788 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014738
 protein coding gene Chr1:5634375-6544000 (-)
WSB/EiJ MGP_WSBEiJ_G0015238
 protein coding gene Chr1:5456849-6397529 (-)



Homology
more
  • Human Ortholog
    SNTG1, syntrophin gamma 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    SNTG1, syntrophin gamma 1
  • Synonyms
    G1SYN, SYN4
  • Links
    NCBI Gene ID: 54212
    neXtProt AC: NX_Q9NSN8
    UniProt: Q9NSN8

  • Chr Location
    8q11.21; chr8:49909789-50796692 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    9
  • GO References
    5
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    5
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000025909 Ensembl Gene Model | MGI Sequence Detail 938405 C57BL/6J ±  kb
transcript ENSMUST00000115488 Ensembl | MGI Sequence Detail 1554 Not Applicable  
polypeptide ENSMUSP00000111151 Ensembl | MGI Sequence Detail 517 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 9
    Genomic 2
    cDNA 7

    Microarray probesets 3
References
more
  • Summaries
    All 28
    Gene Ontology 5
    Phenotypes 3
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:173534 Skarnes WC, et al., A conditional knockout resource for the genome-wide study of mouse gene function. Nature. 2011 Jun 16;474(7351):337-42
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory