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Rap2c Gene Detail
Summary
  • Symbol
    Rap2c
  • Name
    RAP2C, member of RAS oncogene family
  • Synonyms
    2010200P20Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1919315
    NCBI Gene: 72065
  • Alliance
    gene page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    ChrX:50092789-50106895 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 28.03 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    224 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1919315
 protein coding gene ChrX:50092789-50108966 (-)
129S1/SvImJ MGP_129S1SvImJ_G0035710
 protein coding gene ChrX:46155221-46169311 (-)
A/J MGP_AJ_G0035693
 protein coding gene ChrX:46037303-46051391 (-)
AKR/J MGP_AKRJ_G0035613
 protein coding gene ChrX:47294257-47308343 (-)
BALB/cJ MGP_BALBcJ_G0035679
 protein coding gene ChrX:45627740-45641830 (-)
C3H/HeJ MGP_C3HHeJ_G0035383
 protein coding gene ChrX:46427507-46441581 (-)
C57BL/6NJ MGP_C57BL6NJ_G0036208
 protein coding gene ChrX:47266862-47282621 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0033060
 protein coding gene ChrX:43594202-43608105 (-)
CAST/EiJ MGP_CASTEiJ_G0034674
 protein coding gene ChrX:33882043-33896142 (-)
CBA/J MGP_CBAJ_G0035357
 protein coding gene ChrX:48569807-48583889 (-)
DBA/2J MGP_DBA2J_G0035512
 protein coding gene ChrX:45862505-45876594 (-)
FVB/NJ MGP_FVBNJ_G0035460
 protein coding gene ChrX:45565551-45579641 (-)
LP/J MGP_LPJ_G0035599
 protein coding gene ChrX:46498078-46512250 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0035499
 protein coding gene ChrX:50101844-50121048 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0036226
 protein coding gene ChrX:46064015-46078105 (-)
PWK/PhJ MGP_PWKPhJ_G0034373
 protein coding gene ChrX:33399930-33414178 (-)
SPRET/EiJ MGP_SPRETEiJ_G0034218
 protein coding gene ChrX:34670339-34685860 (-)
WSB/EiJ MGP_WSBEiJ_G0034818
 protein coding gene ChrX:45608857-45622951 (-)



Homology
more
  • Human Ortholog
    RAP2C, RAP2C, member of RAS oncogene family
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RAP2C, RAP2C, member of RAS oncogene family
  • Links
    NCBI Gene ID: 57826
    neXtProt AC: NX_Q9Y3L5
    UniProt: Q9Y3L5

  • Chr Location
    Xq26.2; chrX:132203024-132219480 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    31
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    708
  • Tissues
    2
  • cDNA Data
    67
  • Literature Summary
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000050029 Ensembl Gene Model | MGI Sequence Detail 14107 C57BL/6J ±  kb
transcript ENSMUST00000053593 Ensembl | MGI Sequence Detail 3545 Not Applicable  
polypeptide ENSMUSP00000058391 Ensembl | MGI Sequence Detail 183 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 68
    cDNA 67
    Other 1

    Microarray probesets 4
Other
Accession IDs
less
MGI:2147851, MGI:2147945
References
more
  • Summaries
    All 31
    Developmental Gene Expression 1
    Gene Ontology 6
    Phenotypes 2
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:309780 Wang JC, et al., The Rap2c GTPase facilitates B cell receptor-induced reorientation of the microtubule-organizing center. Small GTPases. 2020 Nov;11(6):402-412
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory