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Cimip5 Gene Detail
Summary
  • Symbol
    Cimip5
  • Name
    ciliary microtubule inner protein 5
  • Synonyms
    2410004P03Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1920917
    NCBI Gene: 73667
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr12:17054958-17061759 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 12, 8.04 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    369 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1920917
 protein coding gene Chr12:17053320-17061759 (-)
129S1/SvImJ MGP_129S1SvImJ_G0019615
 protein coding gene Chr12:14411173-14419431 (-)
A/J MGP_AJ_G0019582
 protein coding gene Chr12:13910757-13919890 (-)
AKR/J MGP_AKRJ_G0019552
 protein coding gene Chr12:14563555-14571895 (-)
BALB/cJ MGP_BALBcJ_G0019558
 protein coding gene Chr12:14154888-14163422 (-)
C3H/HeJ MGP_C3HHeJ_G0019363
 protein coding gene Chr12:14475439-14484988 (-)
C57BL/6NJ MGP_C57BL6NJ_G0020006
 protein coding gene Chr12:14897897-14907849 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0017632
 protein coding gene Chr12:13415260-13423717 (-)
CAST/EiJ MGP_CASTEiJ_G0018918
 protein coding gene Chr12:14360116-14370371 (-)
CBA/J MGP_CBAJ_G0019334
 protein coding gene Chr12:15703063-15714747 (-)
DBA/2J MGP_DBA2J_G0019447
 protein coding gene Chr12:13827709-13836428 (-)
FVB/NJ MGP_FVBNJ_G0019438
 protein coding gene Chr12:13714129-13722453 (-)
LP/J MGP_LPJ_G0019518
 protein coding gene Chr12:14530283-14540131 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0019473
 protein coding gene Chr12:15586520-15597002 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0020045
 protein coding gene Chr12:14253429-14261755 (-)
PWK/PhJ MGP_PWKPhJ_G0018684
 protein coding gene Chr12:13864511-13873326 (-)
SPRET/EiJ MGP_SPRETEiJ_G0018474
 protein coding gene Chr12:14462144-14470523 (-)
WSB/EiJ MGP_WSBEiJ_G0018969
 protein coding gene Chr12:14374753-14383011 (-)



Homology
more
  • Human Ortholog
    CIMIP5, ciliary microtubule inner protein 5
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CIMIP5, ciliary microtubule inner protein 5
  • Synonyms
    C2orf50
  • Links
    NCBI Gene ID: 130813
    neXtProt AC: NX_Q96LR7
    UniProt: Q96LR7

  • Chr Location
    2p25.1; chr2:11133128-11154576 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    4
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 73667 NCBI Gene Model | MGI Sequence Detail 6802 C57BL/6J ±  kb
transcript NM_001201332 RefSeq | MGI Sequence Detail 1626 C57BL/6  
polypeptide NP_001188262 RefSeq | MGI Sequence Detail 205 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR020339 Ciliary microtubule inner protein 1-like
Molecular
Reagents
less
  • All nucleic 6
    Genomic 2
    cDNA 4

    Microarray probesets 2
Other
Accession IDs
less
MGI:7716859
References
more
  • Summaries
    All 16
    Phenotypes 1
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory