About   Help   FAQ
Lyrm1 Gene Detail
Summary
  • Symbol
    Lyrm1
  • Name
    LYR motif containing 1
  • Synonyms
    1110065L10Rik, 2310004B22Rik, 4930404J24Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1921169
    NCBI Gene: 73919
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr7:119495038-119515979 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 64.31 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    502 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1921169
 protein coding gene Chr7:119495038-119556186 (+)
129S1/SvImJ MGP_129S1SvImJ_G0032921
 protein coding gene Chr7:123831284-123854887 (+)
A/J MGP_AJ_G0032904
 protein coding gene Chr7:120625330-120647571 (+)
AKR/J MGP_AKRJ_G0032836
 protein coding gene Chr7:123741091-123763206 (+)
BALB/cJ MGP_BALBcJ_G0032909
 protein coding gene Chr7:120358681-120380414 (+)
C3H/HeJ MGP_C3HHeJ_G0032619
 protein coding gene Chr7:123646909-123668658 (+)
C57BL/6NJ MGP_C57BL6NJ_G0033415
 protein coding gene Chr7:128728448-128750876 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0030387
 protein coding gene Chr7:122057904-122077804 (+)
CAST/EiJ MGP_CASTEiJ_G0031947
 protein coding gene Chr7:115399076-115422022 (+)
CBA/J MGP_CBAJ_G0032592
 protein coding gene Chr7:133023376-133049342 (+)
DBA/2J MGP_DBA2J_G0032744
 protein coding gene Chr7:118674954-118696253 (+)
FVB/NJ MGP_FVBNJ_G0032697
 protein coding gene Chr7:118514913-118535742 (+)
LP/J MGP_LPJ_G0032838
 protein coding gene Chr7:125284790-125307461 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0032729
 protein coding gene Chr7:134487552-134510103 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0033435
 protein coding gene Chr7:122715202-122737493 (+)
PWK/PhJ MGP_PWKPhJ_G0031655
 protein coding gene Chr7:111593118-111614746 (+)
SPRET/EiJ MGP_SPRETEiJ_G0031501
 protein coding gene Chr7:109470358-109491622 (+)
WSB/EiJ MGP_WSBEiJ_G0032060
 protein coding gene Chr7:123621845-123642922 (+)



Homology
more
  • Human Ortholog
    LYRM1, LYR motif containing 1
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    LYRM1, LYR motif containing 1
  • Synonyms
    A211C6.1
  • Links
    NCBI Gene ID: 57149
    neXtProt AC: NX_O43325
    UniProt: O43325

  • Chr Location
    16p12.3; chr16:20899868-20925006 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    7 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    3
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    7
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 73919 NCBI Gene Model | MGI Sequence Detail 20942 C57BL/6J ±  kb
transcript NM_029610 RefSeq | MGI Sequence Detail 1282 C57BL/6  
polypeptide Q9CQB7 UniProt | EBI | MGI Sequence Detail 122 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 7
    cDNA 7

    Microarray probesets 3
Other
Accession IDs
less
MGI:1916156, MGI:1923685
References
more
  • Summaries
    All 27
    Gene Ontology 3
    Phenotypes 7
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory