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Rnf183 Gene Detail
Summary
  • Symbol
    Rnf183
  • Name
    ring finger protein 183
  • Synonyms
    5830442J12Rik
  • Feature Type
    protein coding gene
  • IDs
    MGI:1923322
    NCBI Gene: 76072
  • Alliance
    gene page
  • Transcription Start Sites
    3 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:62345777-62353487 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 33.13 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    279 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_1923322
 protein coding gene Chr4:62345777-62353489 (-)
129S1/SvImJ MGP_129S1SvImJ_G0028352
 protein coding gene Chr4:61413559-61421245 (-)
A/J MGP_AJ_G0028313
 protein coding gene Chr4:59187106-59194788 (-)
AKR/J MGP_AKRJ_G0028262
 protein coding gene Chr4:60825446-60835155 (-)
BALB/cJ MGP_BALBcJ_G0028333
 protein coding gene Chr4:59362527-59370492 (-)
C3H/HeJ MGP_C3HHeJ_G0028051
 protein coding gene Chr4:61332974-61340755 (-)
C57BL/6NJ MGP_C57BL6NJ_G0028773
 protein coding gene Chr4:63517069-63524770 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0026079
 protein coding gene Chr4:56478109-56485958 (-)
CAST/EiJ MGP_CASTEiJ_G0027487
 protein coding gene Chr4:59271411-59280553 (-)
CBA/J MGP_CBAJ_G0028018
 protein coding gene Chr4:65711604-65719283 (-)
DBA/2J MGP_DBA2J_G0028168
 protein coding gene Chr4:59044838-59052532 (-)
FVB/NJ MGP_FVBNJ_G0028133
 protein coding gene Chr4:58293850-58301441 (-)
LP/J MGP_LPJ_G0028265
 protein coding gene Chr4:61694139-61701941 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0028160
 protein coding gene Chr4:68850615-68856663 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0028809
 protein coding gene Chr4:60927030-60934689 (-)
PWK/PhJ MGP_PWKPhJ_G0027214
 protein coding gene Chr4:57524514-57532420 (-)
SPRET/EiJ MGP_SPRETEiJ_G0027043
 protein coding gene Chr4:58376876-58384452 (-)
WSB/EiJ MGP_WSBEiJ_G0027567
 protein coding gene Chr4:60912086-60919776 (-)



Homology
more
  • Human Ortholog
    RNF183, ring finger protein 183
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    RNF183, ring finger protein 183
  • Links
    NCBI Gene ID: 138065
    neXtProt AC: NX_Q96D59
    UniProt: Q96D59

  • Chr Location
    9q32; chr9:113297093-113303376 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    25
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    742
  • Tissues
    23
  • cDNA Data
    10
  • Literature Summary
    2
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 76072 NCBI Gene Model | MGI Sequence Detail 7711 C57BL/6J ±  kb
transcript NM_001379623 RefSeq | MGI Sequence Detail 1430 C57BL/6  
polypeptide Q8QZS5 UniProt | EBI | MGI Sequence Detail 190 Not Applicable  
For the selected sequence
Protein
Information
less
Molecular
Reagents
less
  • All nucleic 10
    cDNA 10

    Microarray probesets 2
References
more
  • Summaries
    All 33
    Developmental Gene Expression 2
    Gene Ontology 6
    Phenotypes 8
  • Earliest
    J:65060 Kawai J, et al., Functional annotation of a full-length mouse cDNA collection. Nature. 2001 Feb 8;409(6821):685-90
  • Latest
    J:345621 Adams DJ, et al., Genetic determinants of micronucleus formation in vivo. Nature. 2024 Mar;627(8002):130-136
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory