Gene Expression Data
Assay Details
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Assay
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Reference:
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J:55583
Tribioli C, et al., The murine Bapx1 homeobox gene plays a critical role in embryonic development of the axial skeleton and spleen. Development. 1999 Dec;126(24):5699-711
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Assay type:
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RNA in situ
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MGI Accession ID:
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MGI:1930223
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Gene symbol:
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Sox9
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Gene name:
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SRY (sex determining region Y)-box 9
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Probe:
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Sox9 probe4
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Probe preparation:
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Antisense labelled with S35 RNA
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Visualized with:
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Autoradiography
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Results
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Specimen
6 Y:
embryonic day 10.5
(more  )
Specimen
6 Y:
(close  )
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Genetic Background:
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involves: 129S1/Sv * 129X1/SvJ * C57BL/6J
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Age:
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embryonic day 10.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS17: body wall mesenchyme |
Present |
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6Y
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Expression in mesenchymal cells migrating to from the sclerotome surrounding the notochord, the precursor of the vertebral body.
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| TS17: trunk sclerotome |
Present |
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6Y
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Expression in mesenchymal cells migrating to from the sclerotome surrounding the notochord, the precursor of the vertebral body.
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Specimen
6 Z:
(close )
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Genetic Background:
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either: (involves: 129S1/Sv * 129X1/SvJ) or (involves: 129S1/Sv * 129X1/SvJ * C57BL/6J)
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Mutant Allele(s):
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Nkx3-2tm1.1Tlu/Nkx3-2tm1.1Tlu
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Age:
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embryonic day 10.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS17: body wall mesenchyme |
Present |
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6Z
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Decrease in expression in cells closest to the notochord and in mesenchymal cells migrating to from the sclerotome surrounding the notochord, the precursor of the vertebral body.
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| TS17: trunk sclerotome |
Present |
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6Z
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Decrease in expression in cells closest to the notochord and in mesenchymal cells migrating to from the sclerotome surrounding the notochord, the precursor of the vertebral body.
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Specimen
6 AA:
embryonic day 12.5
(more )
Specimen
6 AA:
(close )
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Genetic Background:
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involves: 129S1/Sv * 129X1/SvJ * C57BL/6J
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Age:
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embryonic day 12.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS20: axial skeleton |
Present |
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6AA
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Expression in the ventral prevertebral body and in prechondrogenic cells surrounding the notochord.
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| TS20: body wall mesenchyme |
Present |
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6AA
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Expression in the ventral prevertebral body and in prechondrogenic cells surrounding the notochord.
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Specimen
6 BB:
(close )
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Genetic Background:
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either: (involves: 129S1/Sv * 129X1/SvJ) or (involves: 129S1/Sv * 129X1/SvJ * C57BL/6J)
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Mutant Allele(s):
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Nkx3-2tm1.1Tlu/Nkx3-2tm1.1Tlu
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Age:
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embryonic day 12.5
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Age Note:
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Age of embryo at noon of plug day not specified in reference.
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Sex:
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Not Specified
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Type:
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section
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Fixation:
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4% Paraformaldehyde
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Embedding:
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Paraffin
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| Structure |
Level |
Pattern |
Image |
Note |
| TS20: axial skeleton |
Present |
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6BB
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Reduction in expression in the ventral prevertebral body and in prechondrogenic cells surrounding the notochord.
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| TS20: body wall mesenchyme |
Present |
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6BB
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Reduction in expression in the ventral prevertebral body and in prechondrogenic cells surrounding the notochord.
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Analysis Tools
