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Or5d18 Gene Detail
Summary
  • Symbol
    Or5d18
  • Name
    olfactory receptor family 5 subfamily D member 18
  • Synonyms
    GA_x6K02T2Q125-49527073-49526132, MOR174-9, mOR-EG, Olfr73
  • Feature Type
    protein coding gene
  • IDs
    MGI:2151908
    NCBI Gene: 117004
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr2:87864540-87865481 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 49.98 cM, cytoband E1
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    145 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2151908
 protein coding gene Chr2:87862632-87868043 (-)
129S1/SvImJ MGP_129S1SvImJ_G0026041
 protein coding gene Chr2:89090256-89091197 (-)
A/J MGP_AJ_G0026007
 protein coding gene Chr2:85566827-85567768 (-)
AKR/J MGP_AKRJ_G0025981
 protein coding gene Chr2:87904389-87905330 (-)
BALB/cJ MGP_BALBcJ_G0026012
 protein coding gene Chr2:85764330-85765271 (-)
C3H/HeJ MGP_C3HHeJ_G0025769
 protein coding gene Chr2:88134185-88135126 (-)
C57BL/6NJ MGP_C57BL6NJ_G0026460
 protein coding gene Chr2:92081850-92082791 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0023853
 protein coding gene Chr2:82200625-82201566 (-)
CAST/EiJ MGP_CASTEiJ_G0025228
 protein coding gene Chr2:88582793-88583734 (-)
CBA/J MGP_CBAJ_G0025748
 protein coding gene Chr2:95162559-95163500 (-)
DBA/2J MGP_DBA2J_G0025878
 protein coding gene Chr2:85123351-85124292 (-)
FVB/NJ MGP_FVBNJ_G0025843
 protein coding gene Chr2:84228597-84229538 (-)
LP/J MGP_LPJ_G0025979
 protein coding gene Chr2:89154641-89155582 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0025869
 protein coding gene Chr2:98081914-98082855 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0026513
 protein coding gene Chr2:88039611-88040552 (-)
PWK/PhJ MGP_PWKPhJ_G0024968
 protein coding gene Chr2:85032281-85033222 (-)
SPRET/EiJ MGP_SPRETEiJ_G0024774
 protein coding gene Chr2:87944541-87945482 (-)
WSB/EiJ MGP_WSBEiJ_G0025300
 protein coding gene Chr2:88714386-88715327 (-)



Homology
more
  • Human Ortholog
    OR5D16, olfactory receptor family 5 subfamily D member 16
  • Vertebrate Orthologs
    3
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    OR5D16, olfactory receptor family 5 subfamily D member 16
  • Synonyms
    OR11-154
  • Links
    NCBI Gene ID: 390144
    neXtProt AC: NX_Q8NGK9
    UniProt: Q8NGK9

  • Chr Location
    11q12.1
  • Human Ortholog
    OR5D18, olfactory receptor family 5 subfamily D member 18
  • Synonyms
    OR11-143
  • Links
    NCBI Gene ID: 219438
    neXtProt AC: NX_Q8NGL1
    UniProt: Q8NGL1

  • Chr Location
    11q12.1; chr11:55819630-55820571 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from multigenic genotypes
    9 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    13
  • GO References
    3
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    720
  • Tissues
    3
  • Literature Summary
    6
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 117004 NCBI Gene Model | MGI Sequence Detail 942 C57BL/6J ±  kb
transcript NM_054090 RefSeq | MGI Sequence Detail 942 Not Specified  
polypeptide NP_473431 RefSeq | MGI Sequence Detail 313 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR017452 GPCR, rhodopsin-like, 7TM
    IPR000276 G protein-coupled receptor, rhodopsin-like
    IPR000725 Olfactory receptor
Molecular
Reagents
less
  • All nucleic 2
    Genomic 1
    Primer pair 1

    Microarray probesets 2
Other
Accession IDs
less
MGI:7277375
References
more
  • Summaries
    All 32
    Developmental Gene Expression 6
    Gene Ontology 3
    Phenotypes 9
  • Earliest
    J:70805 Kajiya K, et al., Molecular bases of odor discrimination: Reconstitution of olfactory receptors that recognize overlapping sets of odorants. J Neurosci. 2001 Aug 15;21(16):6018-25
  • Latest
    J:347599 Raja R, et al., Insertion of a neomycin selection cassette in the Amigo1 locus alters gene expression in the olfactory epithelium leading to region-specific defects in olfactory receptor neuron development. Genesis. 2024 Apr;62(2):e23594
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory