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Atp8b5 Gene Detail
Summary
  • Symbol
    Atp8b5
  • Name
    ATPase, class I, type 8B, member 5
  • Synonyms
    4930417M19Rik, FetA
  • Feature Type
    protein coding gene
  • IDs
    MGI:2444287
    NCBI Gene: 320571
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr4:43267159-43373833 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 23.01 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    3657 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2444287
 protein coding gene Chr4:43266716-43373833 (+)
129S1/SvImJ MGP_129S1SvImJ_G0028202
 protein coding gene Chr4:41365137-41476825 (+)
A/J MGP_AJ_G0028158
 protein coding gene Chr4:39905571-40011866 (+)
AKR/J MGP_AKRJ_G0028110
 protein coding gene Chr4:40813875-40925237 (+)
BALB/cJ MGP_BALBcJ_G0028178
 protein coding gene Chr4:39996495-40101671 (+)
C3H/HeJ MGP_C3HHeJ_G0027900
 protein coding gene Chr4:41433467-41546008 (+)
C57BL/6NJ MGP_C57BL6NJ_G0028619
 protein coding gene Chr4:42894400-43014380 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025931
 protein coding gene Chr4:37355937-37463678 (+)
CAST/EiJ MGP_CASTEiJ_G0027340
 protein coding gene Chr4:40936453-41052164 (+)
CBA/J MGP_CBAJ_G0027866
 protein coding gene Chr4:44229068-44350678 (+)
DBA/2J MGP_DBA2J_G0028015
 protein coding gene Chr4:39819915-39921789 (+)
FVB/NJ MGP_FVBNJ_G0027982
 protein coding gene Chr4:39037065-39140391 (+)
LP/J MGP_LPJ_G0028114
 protein coding gene Chr4:41424017-41538669 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0028006
 protein coding gene Chr4:47502295-47611229 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028655
 protein coding gene Chr4:41006412-41115434 (+)
PWK/PhJ MGP_PWKPhJ_G0027066
 protein coding gene Chr4:39851840-39959227 (+)
SPRET/EiJ MGP_SPRETEiJ_G0026892
 protein coding gene Chr4:40565159-40681463 (+)
WSB/EiJ MGP_WSBEiJ_G0027420
 protein coding gene Chr4:40909829-41018536 (+)



Homology
more
  • Human Ortholog
    ATP8B5P, ATPase phospholipid transporting 8B5, pseudogene
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ATP8B5P, ATPase phospholipid transporting 8B5, pseudogene
  • Synonyms
    FetA
  • Links
    NCBI Gene ID: 158381

  • Chr Location
    9p13.3; chr9:35406755-35483035 (+)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    6 phenotype references
Male mice for a null allele exhibit normal fertility.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    16
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    13
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000028457 Ensembl Gene Model | MGI Sequence Detail 106675 C57BL/6J ±  kb
    transcript ENSMUST00000107942 Ensembl | MGI Sequence Detail 4463 Not Applicable  
    polypeptide ENSMUSP00000103575 Ensembl | MGI Sequence Detail 1183 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 13
      cDNA 13

      Microarray probesets 2
    References
    more
    • Summaries
      All 27
      Gene Ontology 6
      Phenotypes 6
    • Earliest
      J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
    • Latest
      J:348435 Suzuki A, et al., Individual disruption of 12 testis-enriched genes via the CRISPR/Cas9 system does not affect the fertility of male mice. J Reprod Immunol. 2024;:104252
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    12/10/2024
    MGI 6.24     		The Jackson Laboratory