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St6gal2 Gene Detail
Summary
  • Symbol
    St6gal2
  • Name
    beta galactoside alpha 2,6 sialyltransferase 2
  • Synonyms
    C230064G14Rik, ST6Gal II
  • Feature Type
    protein coding gene
  • IDs
    MGI:2445190
    NCBI Gene: 240119
  • Alliance
    gene page
  • Transcription Start Sites
    7 TSS
Location &
Maps
more
  • Sequence Map
    Chr17:55752383-55821582 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 17, 28.82 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    856 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2445190
 protein coding gene Chr17:55752071-55821582 (+)
129S1/SvImJ MGP_129S1SvImJ_G0023895
 protein coding gene Chr17:57075907-57145442 (+)
A/J MGP_AJ_G0023855
 protein coding gene Chr17:55527548-55596709 (+)
AKR/J MGP_AKRJ_G0023822
 protein coding gene Chr17:56200517-56273818 (+)
BALB/cJ MGP_BALBcJ_G0023857
 protein coding gene Chr17:55374044-55447346 (+)
C3H/HeJ MGP_C3HHeJ_G0023619
 protein coding gene Chr17:56924893-56993865 (+)
C57BL/6NJ MGP_C57BL6NJ_G0024300
 protein coding gene Chr17:59298267-59389113 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0021748
 protein coding gene Chr17:51918177-51986457 (+)
CAST/EiJ MGP_CASTEiJ_G0023102
 protein coding gene Chr17:57224649-57300330 (+)
CBA/J MGP_CBAJ_G0023596
 protein coding gene Chr17:61634034-61707278 (+)
DBA/2J MGP_DBA2J_G0023724
 protein coding gene Chr17:54266754-54335615 (+)
FVB/NJ MGP_FVBNJ_G0023690
 protein coding gene Chr17:53812800-53882414 (+)
LP/J MGP_LPJ_G0023804
 protein coding gene Chr17:57790962-57863043 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0023718
 protein coding gene Chr17:61110810-61188687 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0024345
 protein coding gene Chr17:56557554-56627881 (+)
PWK/PhJ MGP_PWKPhJ_G0022847
 protein coding gene Chr17:53627091-53695938 (+)
SPRET/EiJ MGP_SPRETEiJ_G0022659
 protein coding gene Chr17:53347184-53417929 (+)
WSB/EiJ MGP_WSBEiJ_G0023166
 protein coding gene Chr17:57207330-57278130 (+)



Homology
more
  • Human Ortholog
    ST6GAL2, ST6 beta-galactoside alpha-2,6-sialyltransferase 2
  • Vertebrate Orthologs
    4
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    ST6GAL2, ST6 beta-galactoside alpha-2,6-sialyltransferase 2
  • Synonyms
    SIAT2, ST6GalII
  • Links
    NCBI Gene ID: 84620
    neXtProt AC: NX_Q96JF0
    UniProt: Q96JF0

  • Chr Location
    2q12.3
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 1 allele in 1 genetic background
    4 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    12
  • GO References
    7
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    923
  • Tissues
    188
  • cDNA Data
    19
  • Literature Summary
    6
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000024172 Ensembl Gene Model | MGI Sequence Detail 69200 C57BL/6J ±  kb
    transcript ENSMUST00000025000 Ensembl | MGI Sequence Detail 6066 Not Applicable  
    polypeptide ENSMUSP00000025000 Ensembl | MGI Sequence Detail 524 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 22
      cDNA 19
      Primer pair 3

      Microarray probesets 2
    References
    more
    • Summaries
      All 31
      Developmental Gene Expression 6
      Gene Ontology 7
      Phenotypes 4
    • Earliest
      J:80000 The FANTOM Consortium and The RIKEN Genome Exploration Research Group Phase I & II Team, Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Nature. 2002;420:563-573
    • Latest
      J:350469 Alderman PJ, et al., Delayed maturation and migration of excitatory neurons in the juvenile mouse paralaminar amygdala. Neuron. 2024 Feb 21;112(4):574-592.e10
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    11/12/2024
    MGI 6.24     		The Jackson Laboratory