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H4c12 Gene Detail
Summary
  • Symbol
    H4c12
  • Name
    H4 clustered histone 12
  • Synonyms
    Hist1h4k
  • Feature Type
    protein coding gene
  • IDs
    MGI:2448439
    NCBI Gene: 319160
  • Member of
    Hist1 cluster
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr13:21934364-21934675 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 13, 7.95 cM, cytoband A2-A3
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    143 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_2448439
 protein coding gene Chr13:21934315-21934723 (-)
129S1/SvImJ MGP_129S1SvImJ_G0020294
 protein coding gene Chr13:19031636-19031888 (-)
A/J MGP_AJ_G0020249
 protein coding gene Chr13:18607453-18608217 (-)
AKR/J MGP_AKRJ_G0020224
 protein coding gene Chr13:18925020-18925331 (-)
BALB/cJ MGP_BALBcJ_G0020238
 protein coding gene Chr13:18660059-18667321 (-)
C3H/HeJ MGP_C3HHeJ_G0020042
 protein coding gene Chr13:19016866-19017177 (-)
C57BL/6NJ MGP_C57BL6NJ_G0020681
 protein coding gene Chr13:19708887-19709298 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0018290
 protein coding gene Chr13:16928150-16928629 (-)
CAST/EiJ MGP_CASTEiJ_G0019576
 protein coding gene Chr13:18825811-18826122 (-)
CBA/J MGP_CBAJ_G0020004
 protein coding gene Chr13:20380844-20381155 (-)
DBA/2J MGP_DBA2J_G0020124
 protein coding gene Chr13:18241987-18242298 (-)
FVB/NJ MGP_FVBNJ_G0020109
 protein coding gene Chr13:17902618-17903842 (-)
LP/J MGP_LPJ_G0020197
 protein coding gene Chr13:19266687-19266998 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0020142
 protein coding gene Chr13:20763603-20765763 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0020710
 protein coding gene Chr13:18739572-18739883 (-)
PWK/PhJ no annotation
SPRET/EiJ MGP_SPRETEiJ_G0019145
 protein coding gene Chr13:17717053-17717405 (+)
WSB/EiJ MGP_WSBEiJ_G0019633
 protein coding gene Chr13:18821276-18821540 (-)



Homology
more
  • Human Ortholog
    H4C5, H4 clustered histone 5
  • Vertebrate Orthologs
    16
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    H4C5, H4 clustered histone 5
  • Synonyms
    H4-16, H4C1, H4C11, H4C12, H4C13, H4C14, H4C15, H4C16, H4C2, H4C3, H4C4, H4C6, H4C8, H4C9, H4FJ, H4/j, HIST1H4E, TEBIVANED3, TEVANED3
  • Links
    NCBI Gene ID: 8367
    neXtProt AC: NX_P62805
    UniProt: P62805

  • Chr Location
    6p22.2; chr6:26204610-26205021 (+)  GRCh38
  • Human Ortholog
    H4C8, H4 clustered histone 8
  • Synonyms
    H4-16, H4C1, H4C11, H4C12, H4C13, H4C14, H4C15, H4C16, H4C2, H4C3, H4C4, H4C5, H4C6, H4C9, H4FH, H4/h, HIST1H4H
  • Links
    NCBI Gene ID: 8365
    neXtProt AC: NX_P62805
    UniProt: P62805

  • Chr Location
    6p22.2; chr6:26277609-26285638 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    8 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving H4c12
  • Find Mice (IMSR)
    5 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    737
  • Tissues
    23
  • cDNA Data
    7
  • Literature Summary
    1
Sequences &
Gene Models
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Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000064288 Ensembl Gene Model | MGI Sequence Detail 312 C57BL/6J ±  kb
transcript ENSMUST00000102983 Ensembl | MGI Sequence Detail 312 Not Applicable  
polypeptide ENSMUSP00000100048 Ensembl | MGI Sequence Detail 103 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 9
    Genomic 1
    cDNA 7
    Primer pair 1
Other
Accession IDs
less
MGI:6325002
References
more
  • Summaries
    All 20
    Developmental Gene Expression 1
    Phenotypes 8
  • Earliest
    J:182573 Roderick TH, Producing and detecting paracentric chromosomal inversions in mice. Mutat Res. 1971 Jan;11(1):59-69
  • Latest
    J:175731 Liu LJ, et al., Functional coupling of transcription factor HiNF-P and histone H4 gene expression during pre- and post-natal mouse development. Gene. 2011 Sep 1;483(1-2):1-10
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory