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Gene Expression Data
Assay Details
Assay
Reference: J:76911 Xu J, et al., Sex differences in sex chromosome gene expression in mouse brain. Hum Mol Genet. 2002 Jun 1;11(12):1409-19
Assay type: Northern blot
MGI Accession ID: MGI:2651524
Gene symbol: Kdm5d
Gene name: lysine demethylase 5D
Probe: Smcx/y
Probe preparation: Antisense labelled with P32 DNA
Visualized with: Phosphorimaging
Assay notes: This probe is a mixture that also recognizes Smcx (MGI:99781). This assay was designed to clarify that expression of the Y homolog (Smcy) in males did not eliminate the male/female dosage imbalance of the X homolog (Smcx) shown in Figure 5. Graph in Figure 6B displays summed expression of the X and Y homolog pair quantified from this northern blot in males vs. females. The probe used in this assay was 5' labelled.
Results Image: 6A. Smcx/y
 Sample Information Bands Other Sample Information
Lane AgeStructure 8.4 kb (a) 5.3 kb (a) Amount Genetic BackgroundMutant Allele(s)Sex
Male P adult TS28: brain Present Present 4 µg; poly-A+ RNA C57BL/6J Male
Male P adult TS28: brain Present Present 4 µg; poly-A+ RNA C57BL/6J Male
Male P adult TS28: brain Present Present 4 µg; poly-A+ RNA C57BL/6J Male
Male P adult TS28: brain Present Present 4 µg; poly-A+ RNA C57BL/6J Male
Female P adult TS28: brain Present Present 4 µg; poly-A+ RNA C57BL/6J Female
Female P adult TS28: brain Present Present 4 µg; poly-A+ RNA C57BL/6J Female
Female P adult TS28: brain Present Present 4 µg; poly-A+ RNA C57BL/6J Female
Female P adult TS28: brain Present Present 4 µg; poly-A+ RNA C57BL/6J Female
Notes:
(a) Male lanes had lower hybridization signal than female lanes.

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
09/17/2024
MGI 6.24
The Jackson Laboratory