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Gene Expression Data
Assay Details
Assay
Reference: J:76231 Jaszai J, et al., Cloning and expression of Ventrhoid, a novel vertebrate homologue of the Drosophila EGF pathway gene rhomboid. Mech Dev. 2002 Apr;113(1):73-7
Assay type: RNA in situ
MGI Accession ID: MGI:3029352
Gene symbol: Rhbdl3
Gene name: rhomboid like 3
Probe: Vrho cDNA2
Probe preparation: Antisense labelled with digoxigenin RNA
Results
Specimen 2A: embryonic day 8.0 (more )
Note: 4 somite stage.
Structure Level Pattern Image Note
TS12: future spinal cord neural fold Present 2A

Specimen 2B: embryonic day 8.0 (more )
Note: 4 somite stage.
Structure Level Pattern Image Note
TS12: future spinal cord neural fold Present 2B

Specimen 2C: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: neural tube Present 2C
TS13: 1st branchial arch Present Regionally restricted 2C Expression is at the base.

Specimen 2D: embryonic day 8.75 (more )
Structure Level Pattern Image Note
TS14: future midbrain roof plate Present Regionally restricted 2D Expression is in the prospective pretectum.
TS14: 1st branchial arch Present 2D Expression is at the base.

Specimen Not Shown: embryonic day 8.5-8.75 (more )
Structure Level Pattern Image Note
TS13: 1st branchial arch ectoderm Present

Specimen 2E: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: trunk somite Present 2E Expression is in the caudal part of the last formed somites.

Specimen 3A: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: prosencephalon Present Regionally restricted 3A Expression is in the ventral forebrain.
TS14: future diencephalon Strong Regionally restricted 3A Expression is dorsal.
TS14: future midbrain roof plate Strong Regionally restricted 3A Expression is in the prospective pretectum.
TS14: future hindbrain Present Regionally restricted 3A Expression is in the metencephalon.
TS14: 1st branchial arch Present 3A

Specimen 3B: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: neural tube Present Regionally restricted 3B Expression is ventral.

Specimen 3C: embryonic day 9.0 (more )
Structure Level Pattern Image Note
TS14: neural tube Present Graded 3C Expression is less prominent in the ontogenetically younger more caudal part of the tube.
TS14: hindgut diverticulum Strong 3C

Specimen 3D: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: neural tube Present Graded 3D Expression is less prominent in the ontogenetically younger more caudal part of the tube.
TS15: tail neural tube Present Graded 3D Expression is less prominent in the ontogenetically younger more caudal part of the tube.
TS15: hindgut diverticulum Strong 3D
TS15: otocyst Present 3D
TS15: diencephalon Strong 3D
TS15: future midbrain roof plate Strong Regionally restricted 3D Expression is in the prospective pretectum.
TS15: future hindbrain Present Regionally restricted 3D Expression is in the ventral metencephalon.

Specimen 3E: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: otocyst Strong 3E
TS15: diencephalon Strong 3E
TS15: future midbrain roof plate Strong Regionally restricted 3E Expression is in the prospective pretectum.
TS15: future hindbrain Present Regionally restricted 3E Expression is in the ventral metencephalon.
TS15: 1st branchial arch Present 3E
TS15: trigeminal preganglion Present 3E

Specimen 3F: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: neural tube Present 3F

Specimen 3G: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: neural tube Present Graded 3G Expression is less prominent in the ontogenetically younger more caudal part of the tube.
TS16: tail future spinal cord Present Graded 3G Expression is less prominent in the ontogenetically younger more caudal part of the tube.
TS16: hindgut diverticulum Strong 3G
TS16: otocyst Present 3G
TS16: future forebrain Present Regionally restricted 3G Expression is ventral.
TS16: diencephalon Strong 3G
TS16: future midbrain roof plate Strong Regionally restricted 3G Expression is in the prospective pretectum.
TS16: future hindbrain Present Regionally restricted 3G Expression is in the ventral metencephalon.
TS16: 1st branchial arch Present 3G
TS16: facio-acoustic ganglion complex Present 3G

Specimen 4A: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: embryo Present 4A

Specimen 4B: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: future hindbrain Present Regionally restricted 4B Expression is in the pretectum at both sides of the ventral midline extending into the alar plate.
TS16: future midbrain roof plate Present Regionally restricted 4B Expression is in the pretectum at both sides of the ventral midline extending into the alar plate.
TS16: diencephalon Present 4B

Specimen 4C: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: future hindbrain Present Regionally restricted 4C Expression in the metencephalon is ventral.

Specimen 4D: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: otocyst Present 4D
TS16: future hindbrain Present Regionally restricted 4D Expression is absent in the ventral rhombencephalon at the level of the otic vesicles, although it is present elsewhere in the rhombencephalon.

Specimen 4E: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: future hindbrain Weak Regionally restricted 4E Expression is at the transition of the rhombencephalon and the spinal neural tube.
TS16: neural tube Weak Regionally restricted 4E Expression is at the transition of the rhombencephalon and the spinal neural tube.

Specimen 4F: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: neural tube Strong 4F This section is at the level of the forelimbs. Expression is in two longitudinal stripes along both sides of the ventral midline. There is a second weak dorsal expression domain.

Specimen 4G: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: neural tube Present Graded 4G Expression decreases towards the ontogenetically younger more caudal parts of the neural tube. Expression is in two longitudinal stripes along both sides of the ventral midline.

Specimen 4H: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: neural tube Present Graded 4H Expression decreases towards the ontogenetically younger more caudal parts of the neural tube. Expression is in two longitudinal stripes along both sides of the ventral midline.
TS16: hindgut diverticulum Present 4H

Specimen 4I: embryonic day 10.0 (more )
Structure Level Pattern Image Note
TS16: tail future spinal cord Present Regionally restricted 4I This section is at the most caudal part of the neural tube, where expression is absent; more rostral parts do contain expression.
TS16: hindgut diverticulum Present 4I


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last database update
12/10/2024
MGI 6.24
The Jackson Laboratory