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Smarce1-ps1 Pseudogene Detail
Summary
  • Symbol
    Smarce1-ps1
  • Name
    SWI/SNF related BAF chromatin remodeling complex subunit E1, pseodogene 1
  • Synonyms
    Gm1815, LOC211895
  • Feature Type
    pseudogene
  • IDs
    MGI:3037673
    NCBI Gene: 211895
  • Alliance
Location &
Maps
more
  • Sequence Map
    Chr8:42110630-42111706 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
  • Genetic Map
    Chromosome 8, 23.89 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    43 from dbSNP Build 142
  • Strain Annotations
    11
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3037673
pseudogene Chr8:42110551-42111707 (-)
129S1/SvImJ MGP_129S1SvImJ_G0012530
pseudogene Chr4:13288944-13290004 (-)
A/J no annotation
AKR/J MGP_AKRJ_G0012490
pseudogene Chr4:13189292-13190352 (-)
BALB/cJ MGP_BALBcJ_G0012509
pseudogene Chr4:12866991-12868051 (-)
C3H/HeJ MGP_C3HHeJ_G0012369
pseudogene Chr4:13301997-13303057 (-)
C57BL/6NJ no annotation
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0012348
pseudogene Chr4:14161324-14162384 (-)
DBA/2J MGP_DBA2J_G0013181
pseudogene Chr5:145409725-145410679 (+)
FVB/NJ MGP_FVBNJ_G0012406
pseudogene Chr4:12523601-12524661 (-)
LP/J MGP_LPJ_G0011010
pseudogene Chr13:65245292-65246353 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0012414
pseudogene Chr4:14512797-14513857 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0012825
pseudogene Chr4:13139599-13140659 (-)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
Sequences &
Gene Models
less
  • All Sequences
  • RefSeq
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000094568 Ensembl Gene Model | MGI Sequence Detail 1077 C57BL/6J ±  kb
transcript ENSMUST00000180067 Ensembl | MGI Sequence Detail 1077 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 5
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Funding Information
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last database update
11/19/2024
MGI 6.24
The Jackson Laboratory