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Mir96 Gene Detail
Summary
  • Symbol
    Mir96
  • Name
    microRNA 96
  • Synonyms
    mir 96, Mirn96, mmu-mir-96
Location &
Maps
more
  • Sequence Map
    Chr6:30169445-30169550 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 12.52 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    72 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3619440
 miRNA gene Chr6:30169445-30169550 (-)
129S1/SvImJ MGP_129S1SvImJ_G0008889
 miRNA gene Chr6:28022627-28022732 (-)
A/J MGP_AJ_G0008874
 miRNA gene Chr6:26824443-26824548 (-)
AKR/J MGP_AKRJ_G0008864
 miRNA gene Chr6:27709468-27709573 (-)
BALB/cJ MGP_BALBcJ_G0008862
 miRNA gene Chr6:26981975-26982080 (-)
C3H/HeJ MGP_C3HHeJ_G0008801
 miRNA gene Chr6:27711651-27711756 (-)
C57BL/6NJ MGP_C57BL6NJ_G0009091
 miRNA gene Chr6:28832796-28832901 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0008012
 miRNA gene Chr6:25032811-25032916 (-)
CAST/EiJ MGP_CASTEiJ_G0008644
 miRNA gene Chr6:27523448-27523553 (-)
CBA/J MGP_CBAJ_G0008768
 miRNA gene Chr6:29907993-29908098 (-)
DBA/2J MGP_DBA2J_G0008800
 miRNA gene Chr6:26762581-26762686 (-)
FVB/NJ MGP_FVBNJ_G0008818
 miRNA gene Chr6:26523290-26523395 (-)
LP/J MGP_LPJ_G0008893
 miRNA gene Chr6:28158008-28158113 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0008784
 miRNA gene Chr6:32383635-32383740 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0009068
 miRNA gene Chr6:27597854-27597959 (-)
PWK/PhJ MGP_PWKPhJ_G0008571
 miRNA gene Chr6:26323702-26323807 (-)
SPRET/EiJ MGP_SPRETEiJ_G0008416
 miRNA gene Chr6:27331720-27331825 (-)
WSB/EiJ MGP_WSBEiJ_G0008740
 miRNA gene Chr6:27568324-27568429 (-)



Homology
more
  • Human Ortholog
    MIR96, microRNA 96
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    MIR96, microRNA 96
  • Synonyms
    DFNA50, hsa-mir-96, miR-96, MIRN96, miRNA96
  • Links
    NCBI Gene ID: 407053

  • Chr Location
    chr7:129774692-129774769 (-)  GRCh38
Human Diseases
more
  • Diseases
    2 with human MIR96 associations

Human Disease Mouse Models
      
IDs
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
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  • Phenotype Summary
    15 phenotypes from 2 alleles in 2 genetic backgrounds
    16 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
  • All Mutations and Alleles
    10
  • Chemically induced (ENU)
    1
  • Endonuclease-mediated
    3
  • Targeted
    6
  • Genomic Mutations
    1 involving Mir96
  • Find Mice (IMSR)
    8 strains or lines available
Mice homozygous and heterozygous for an ENU-induced mutation exhibit hearing loss associated with hair cell degeneration.
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
    16
  • GO References
    6
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    843
  • Tissues
    69
  • Literature Summary
    19
Sequences &
Gene Models
less
  • All Sequences
    23
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 723886 NCBI Gene Model | MGI Sequence Detail 106 C57BL/6J ±  kb
transcript NR_029750 RefSeq | MGI Sequence Detail 106 C57BL/6  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 17
    Primer pair 9
    Other 8
Other Database
Links
less
miRBase MI0000583
References
more
  • Summaries
    All 64
    Developmental Gene Expression 19
    Gene Ontology 6
    Phenotypes 16
  • Earliest
    J:105741 Griffiths-Jones S, et al., miRBase: microRNA sequences, targets and gene nomenclature. Nucleic Acids Res. 2006 Jan 1;34(Database issue):D140-4
  • Latest
    J:357737 Rao F, et al., Overexpression of miR-96 leads to retinal degeneration in mice. Biochem Biophys Res Commun. 2024 Jul 30;719:150048
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory