About   Help   FAQ
Gm5871 Pseudogene Detail
Summary
  • Symbol
    Gm5871
  • Name
    predicted gene 5871
  • Feature Type
    pseudogene
  • IDs
    MGI:3644058
    NCBI Gene: 545792
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr5:109164064-109164781 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 53.24 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    77 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3644058
 pseudogene Chr5:109164064-109164834 (-)
129S1/SvImJ MGP_129S1SvImJ_G0013229
 pseudogene Chr5:111224420-111225137 (-)
A/J MGP_AJ_G0013209
 pseudogene Chr5:106944079-106944796 (-)
AKR/J MGP_AKRJ_G0013176
 pseudogene Chr5:110366617-110367334 (-)
BALB/cJ MGP_BALBcJ_G0013189
 pseudogene Chr5:108100546-108101263 (-)
C3H/HeJ MGP_C3HHeJ_G0013037
 pseudogene Chr5:110856643-110857360 (-)
C57BL/6NJ MGP_C57BL6NJ_G0013555
 pseudogene Chr5:115705090-115705807 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0010306
 pseudogene Chr19:49878688-49887580 (-)
CAST/EiJ MGP_CASTEiJ_G0011158
 pseudogene Chr19:52652910-52661872 (-)
CBA/J MGP_CBAJ_G0013007
 pseudogene Chr5:119706293-119707010 (-)
DBA/2J MGP_DBA2J_G0013090
 pseudogene Chr5:107013385-107014102 (-)
FVB/NJ MGP_FVBNJ_G0013089
 pseudogene Chr5:105740875-105741592 (-)
LP/J MGP_LPJ_G0013162
 pseudogene Chr5:111817548-111818265 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0013108
 pseudogene Chr5:124530720-124531437 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0013557
 pseudogene Chr5:109885563-109886280 (-)
PWK/PhJ MGP_PWKPhJ_G0011016
 pseudogene Chr19:50600511-50609551 (-)
SPRET/EiJ MGP_SPRETEiJ_G0012375
 pseudogene Chr5:107373969-107374686 (-)
WSB/EiJ MGP_WSBEiJ_G0012802
 pseudogene Chr5:110216829-110217546 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Gm5871
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    21
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000093545 Ensembl Gene Model | MGI Sequence Detail 718 C57BL/6J ±  kb
transcript ENSMUST00000176461 Ensembl | MGI Sequence Detail 718 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 9
    Phenotypes 5
  • Earliest
    J:134667 Roderick TH, et al., Two radiation-induced chromosomal inversions in mice (Mus musculus). Proc Natl Acad Sci U S A. 1970 Oct;67(2):961-7
  • Latest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory