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Prb1c Gene Detail
Summary
  • Symbol
    Prb1c
  • Name
    proline-rich protein BstNI subfamily 1C
  • Synonyms
    Gm8882
  • Feature Type
    protein coding gene
  • IDs
    MGI:3645847
    NCBI Gene: 667929
  • Alliance
    gene page
  • Transcription Start Sites
    1 TSS
Location &
Maps
more
  • Sequence Map
    Chr6:132338068-132341097 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 6, 64.03 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    225 from dbSNP Build 142
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3645847
 protein coding gene Chr6:132338004-132341097 (-)
129S1/SvImJ MGP_129S1SvImJ_G0031379
 protein coding gene Chr6:136533640-136541521 (-)
A/J MGP_AJ_G0031354
 protein coding gene Chr6:131019269-131123009 (-)
AKR/J MGP_AKRJ_G0031281
 protein coding gene Chr6:135077251-135082195 (-)
BALB/cJ MGP_BALBcJ_G0031362
 protein coding gene Chr6:130802215-130805411 (-)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0031819
 protein coding gene Chr6:140184746-140197300 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0031042
 protein coding gene Chr6:145561238-145564119 (-)
DBA/2J no annotation
FVB/NJ no annotation
LP/J MGP_LPJ_G0031283
 protein coding gene Chr6:136701137-136712522 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0031188
 protein coding gene Chr6:149152116-149265327 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0031854
 protein coding gene Chr6:134998870-135002251 (-)
PWK/PhJ MGP_PWKPhJ_G0030176
 protein coding gene Chr6:128421984-128426216 (-)
SPRET/EiJ no annotation
WSB/EiJ MGP_WSBEiJ_G0030543
 protein coding gene Chr6:135173853-135174906 (-)



Homology
more
  • Human Ortholog
    PRB1, proline rich protein BstNI subfamily 1
  • Vertebrate Orthologs
    7
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    PRB1, proline rich protein BstNI subfamily 1
  • Synonyms
    PM, PMF, PMS, PRB1L, PRB1M
  • Links
    NCBI Gene ID: 5542
    neXtProt AC: NX_P04280
    UniProt: P04280

  • Chr Location
    12p13.2; chr12:11351821-11355591 (-)  GRCh38
  • Human Ortholog
    PRB2, proline rich protein BstNI subfamily 2
  • Synonyms
    cP7, IB-9, PRPPRB1, Ps
  • Links
    NCBI Gene ID: 653247
    neXtProt AC: NX_P02812
    UniProt: P02812

  • Chr Location
    12p13.2; chr12:11391540-11501041 (-)  GRCh38
  • Human Ortholog
    PRB3, proline rich protein BstNI subfamily 3
  • Synonyms
    G1, PRG
  • Links
    NCBI Gene ID: 5544
    UniProt: Q04118

  • Chr Location
    12p13.2; chr12:11265914-11269707 (-)  GRCh38
  • Human Ortholog
    PRB4, proline rich protein BstNI subfamily 4
  • Synonyms
    Po
  • Links
    NCBI Gene ID: 5545
    UniProt: P10163

  • Chr Location
    12p13.2; chr12:11307077-11310436 (-)  GRCh38
  • Human Ortholog
    PRR4, proline rich 4
  • Synonyms
    LPRP, PROL4
  • Links
    NCBI Gene ID: 11272
    neXtProt AC: NX_Q16378
    UniProt: Q16378

  • Chr Location
    12p13.2; chr12:10845849-10849475 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    3
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 667929 NCBI Gene Model | MGI Sequence Detail 3030 C57BL/6J ±  kb
transcript NM_001177588 RefSeq | MGI Sequence Detail 916 C57BL/6  
polypeptide NP_001171059 RefSeq | MGI Sequence Detail 283 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR026086 Proline-rich protein
Molecular
Reagents
less
  • All nucleic 3
    cDNA 3
Other
Accession IDs
less
MGI:7461510
References
more
  • Summaries
    All 8
  • Earliest
    J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
  • Latest
    J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
10/22/2024
MGI 6.24 		The Jackson Laboratory