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Csnk2a1-ps4 Pseudogene Detail
Summary
  • Symbol
    Csnk2a1-ps4
  • Name
    casein kinase 2, alpha 1 polypeptide, pseudogene 4
  • Synonyms
    Gm11255
  • Feature Type
    pseudogene
  • IDs
    MGI:3649873
    NCBI Gene: 623529
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr4:75242738-75243917 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 4, 36.66 cM
Strain
Comparison
more
  • SNPs within 2kb
    161 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3649873
 pseudogene Chr4:75242538-75244063 (+)
129S1/SvImJ MGP_129S1SvImJ_G0012716
 pseudogene Chr4:74596921-74598100 (+)
A/J MGP_AJ_G0012702
 pseudogene Chr4:72087847-72089026 (+)
AKR/J MGP_AKRJ_G0012674
 pseudogene Chr4:73876962-73878141 (+)
BALB/cJ MGP_BALBcJ_G0012685
 pseudogene Chr4:72228444-72229623 (+)
C3H/HeJ MGP_C3HHeJ_G0012544
 pseudogene Chr4:74464733-74465912 (+)
C57BL/6NJ MGP_C57BL6NJ_G0013014
 pseudogene Chr4:77545662-77546841 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0012541
 pseudogene ChrX:10113652-10114824 (+)
CAST/EiJ MGP_CASTEiJ_G0012299
 pseudogene Chr4:72394543-72395722 (+)
CBA/J MGP_CBAJ_G0012521
 pseudogene Chr4:79869380-79870559 (+)
DBA/2J MGP_DBA2J_G0012581
 pseudogene Chr4:71843130-71844309 (+)
FVB/NJ MGP_FVBNJ_G0012584
 pseudogene Chr4:70904329-70905508 (+)
LP/J MGP_LPJ_G0012654
 pseudogene Chr4:75010352-75011531 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0012593
 pseudogene Chr4:84032787-84033966 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0013019
 pseudogene Chr4:73984891-73986070 (+)
PWK/PhJ MGP_PWKPhJ_G0012124
 pseudogene Chr4:70263689-70264868 (+)
SPRET/EiJ MGP_SPRETEiJ_G0011938
 pseudogene Chr4:71379382-71380559 (+)
WSB/EiJ MGP_WSBEiJ_G0012323
 pseudogene Chr4:74092157-74093336 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Genomic Mutations
    3 involving Csnk2a1-ps4
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    22
  • RefSeq
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000083224 Ensembl Gene Model | MGI Sequence Detail 1180 C57BL/6J ±  kb
transcript ENSMUST00000120448 Ensembl | MGI Sequence Detail 1180 Not Applicable  
For the selected sequence
Other
Accession IDs
less
MGI:6456208
References
more
  • Summaries
    All 8
    Phenotypes 3
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory