Gm12648 MGI Mouse Gene Detail - MGI:3649948

Sequence Map

Chr4:93977813-94313825 bp, - strand
From Ensembl annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649948	lncRNA gene	Chr4:93976375-94313825 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0006466	lincRNA gene	Chr4:94144860-94476209 (-)
A/J	MGP_AJ_G0006458	lincRNA gene	Chr4:90840673-91167897 (-)
AKR/J	MGP_AKRJ_G0006432	lincRNA gene	Chr4:92992959-93327842 (-)
BALB/cJ	MGP_BALBcJ_G0006432	lincRNA gene	Chr4:91084947-91417899 (-)
C3H/HeJ	MGP_C3HHeJ_G0006382	lincRNA gene	Chr4:93833937-94171542 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0006598	lincRNA gene	Chr4:97743259-98083617 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0006315	lincRNA gene	Chr4:91708839-92038887 (-)
CBA/J	MGP_CBAJ_G0006365	lincRNA gene	Chr4:100721555-101073607 (-)
DBA/2J	MGP_DBA2J_G0006387	lincRNA gene	Chr4:90614771-90943050 (-)
FVB/NJ	MGP_FVBNJ_G0006409	lincRNA gene	Chr4:89482473-89808487 (-)
LP/J	MGP_LPJ_G0006468	lincRNA gene	Chr4:94467444-94799090 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0006396	lincRNA gene	Chr4:106475522-106832152 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0006602	lincRNA gene	Chr4:93282022-93621109 (-)
PWK/PhJ	MGP_PWKPhJ_G0006252	lincRNA gene	Chr4:88774058-89105610 (-)
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0006361	lincRNA gene	Chr4:93441170-93776322 (-)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	ENSMUSG00000085931	Ensembl Gene Model \| MGI Sequence Detail	336013	C57BL/6J	± kb
	transcript	ENSMUST00000126270	Ensembl \| MGI Sequence Detail	656	Not Applicable

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Summaries

All 10

Phenotypes 3
Earliest

J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
Latest

J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;

TSS for Gm12648:

(View these features in JBrowse)

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources Funding Information Warranty Disclaimer, Privacy Notice, Licensing, & Copyright Send questions and comments to User Support.	last database update 11/12/2024 MGI 6.24