Ptf1aos MGI Mouse Gene Detail - MGI:3651438 - pancreas specific transcription factor 1a, opposite strand

Sequence Map

Chr2:19446319-19451485 bp, - strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3651438	antisense lncRNA gene	Chr2:19446319-19451485 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0003512	antisense lncRNA gene	Chr2:17181895-17188078 (-)
A/J	MGP_AJ_G0003492	antisense lncRNA gene	Chr2:16474843-16479949 (-)
AKR/J	MGP_AKRJ_G0003471	antisense lncRNA gene	Chr2:17046857-17051963 (-)
BALB/cJ	MGP_BALBcJ_G0003481	antisense lncRNA gene	Chr2:16529410-16538216 (-)
C3H/HeJ	MGP_C3HHeJ_G0003429	antisense lncRNA gene	Chr2:16954009-16959096 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0003619	antisense lncRNA gene	Chr2:17645519-17655072 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003129	antisense lncRNA gene	Chr2:15852748-15858622 (-)
CAST/EiJ	MGP_CASTEiJ_G0003392	antisense lncRNA gene	Chr2:16905926-16913907 (-)
CBA/J	MGP_CBAJ_G0003426	antisense lncRNA gene	Chr2:18406128-18411281 (-)
DBA/2J	MGP_DBA2J_G0003434	antisense lncRNA gene	Chr2:16414979-16420083 (-)
FVB/NJ	MGP_FVBNJ_G0003453	antisense lncRNA gene	Chr2:16219648-16224721 (-)
LP/J	MGP_LPJ_G0003507	antisense lncRNA gene	Chr2:17000137-17005242 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003441	antisense lncRNA gene	Chr2:18353304-18358392 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0003622	antisense lncRNA gene	Chr2:16983229-16989477 (-)
PWK/PhJ	MGP_PWKPhJ_G0003348	antisense lncRNA gene	Chr2:16290876-16296042 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0003293	antisense lncRNA gene	Chr2:17118521-17123618 (-)
WSB/EiJ	MGP_WSBEiJ_G0003427	antisense lncRNA gene	Chr2:17062943-17068079 (-)

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Phenotype Summary

11 phenotypes from multigenic genotypes
1 phenotype reference

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	102637107	NCBI Gene Model \| MGI Sequence Detail	5167	C57BL/6J	± kb
	transcript	NR_131924	RefSeq \| MGI Sequence Detail	916	ZRU/MplStud

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Summaries

All 8

Developmental Gene Expression 1

Phenotypes 1
Earliest

J:195133 Semba K, et al., Ectopic expression of Ptf1a induces spinal defects, urogenital defects, and anorectal malformations in Danforth's short tail mice. PLoS Genet. 2013 Feb;9(2):e1003204

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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