Gm4419 MGI Mouse Gene Detail - MGI:3782604

Sequence Map

Chr12:21467883-21471065 bp, + strand
From NCBI annotation of GRCm39
View this region in JBrowse
Genome Browsers

Ensembl | UCSC | NCBI

For selected strains:

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3782604	lncRNA gene	Chr12:21467324-21471065 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0005348	lincRNA gene	Chr12:18977261-18978949 (+)
A/J	MGP_AJ_G0005331	lincRNA gene	Chr12:18272150-18273830 (+)
AKR/J	MGP_AKRJ_G0005311	lincRNA gene	Chr12:19113320-19115000 (+)
BALB/cJ	MGP_BALBcJ_G0005313	lincRNA gene	Chr12:18643306-18644986 (+)
C3H/HeJ	MGP_C3HHeJ_G0005262	lincRNA gene	Chr12:19001574-19003262 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0005467	lincRNA gene	Chr12:19688439-19690126 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0004854	lincRNA gene	Chr12:17866371-17868089 (+)
CAST/EiJ	MGP_CASTEiJ_G0005209	lincRNA gene	Chr12:16269899-16271586 (+)
CBA/J	MGP_CBAJ_G0005251	lincRNA gene	Chr12:20430196-20431884 (+)
DBA/2J	MGP_DBA2J_G0005269	lincRNA gene	Chr12:18298062-18299750 (+)
FVB/NJ	MGP_FVBNJ_G0005294	lincRNA gene	Chr12:18194065-18195753 (+)
LP/J	MGP_LPJ_G0005350	lincRNA gene	Chr12:19080119-19081807 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0005276	lincRNA gene	Chr12:20236596-20238284 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0005469	lincRNA gene	Chr12:18687750-18689438 (+)
PWK/PhJ	MGP_PWKPhJ_G0005158	lincRNA gene	Chr12:15575856-15578232 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0005078	lincRNA gene	Chr12:15982122-15983804 (+)
WSB/EiJ	MGP_WSBEiJ_G0005257	lincRNA gene	Chr12:18869436-18871124 (+)

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Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.

Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.

Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.

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Expression Overview

GXD's primary emphasis is on endogenous gene expression during development. Click on grid cells to view annotations.

Blue cells = expressed in wild-type.
Gray triangles = other expression annotations only
(e.g. absence of expression or data from mutants).

early conceptus	embryo ectoderm	embryo endoderm	embryo mesoderm	embryo mesenchyme	extraembryonic component	alimentary system	auditory system	branchial arches	cardiovascular system	connective tissue	endocrine system	exocrine system	hemolymphoid system	integumental system	limbs	liver and biliary system	musculoskeletal system	nervous system	olfactory system	reproductive system	respiratory system	urinary system	visual system

Click cells to view annotations.

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Representative Sequences				Length	Strain/Species	Flank
	genomic	100043407	NCBI Gene Model \| MGI Sequence Detail	3183	C57BL/6J	± kb
	transcript	NR_166748	RefSeq \| MGI Sequence Detail	680	C57BL/6

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Summaries

All 11

Phenotypes 4
Earliest

J:85162 Hansen J, et al., A large-scale, gene-driven mutagenesis approach for the functional analysis of the mouse genome. Proc Natl Acad Sci U S A. 2003 Aug 19;100(17):9918-22
Latest

J:142754 Hansen GM, et al., Large-scale gene trapping in C57BL/6N mouse embryonic stem cells. Genome Res. 2008 Oct;18(10):1670-9

TSS for Gm4419:

(View these features in JBrowse)

Contributing Projects: Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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