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Gene Expression Data
Assay Details
Assay
Reference: J:54093 Guillaume R, et al., Murine Pkd1 is a developmentally regulated gene from morula to adulthood: role in tissue condensation and patterning. Dev Dyn. 1999 Apr;214(4):337-48
Assay type: RNA in situ
MGI Accession ID: MGI:4356532
Gene symbol: Pkd1
Gene name: polycystin 1, transient receptor potential channel interacting
Probe: Pkd1 cDNA4
Probe preparation: Antisense RNA
Visualized with: Autoradiography
Results
Specimen 5A--embryo: embryonic day 6.5 (more )
Structure Level Pattern Image Note
TS9: embryo ectoderm Strong 5A Expression is uniform.
TS9: embryo endoderm Strong 5A Expression is uniform.
TS9: embryo mesoderm Strong 5A Expression is uniform.

Specimen 5A--mother: postnatal adult (more )
Structure Level Pattern Image Note
TS28: decidua Strong Regionally restricted 5A There is strong expression in the outer decidua, and little to no expression in the inner decidua.
TS28: placenta Strong 5A
TS28: uterus Ambiguous Regionally restricted 5A Expression is weak to absent along the mesometerium or inner uterine mucosa, immediately surrounding the embryo.

Specimen 6A: embryonic day 9.5 (more )
Note: This is a transverse section.
Structure Level Pattern Image Note
TS15: migrating neural crest Present 6A Expression is present in the migrating neural crest, between the neural tube and the myotome.
TS15: neural tube Strong Regionally restricted 6A There is strong expression in the inner (ependymal) and external (marginal) layers of the neural tube.

Specimen 6B: embryonic day 10.5 (more )
Note: This is a sagittal section.
Structure Level Pattern Image Note
TS17: spinal ganglion Present 6B
TS17: ascending aorta Present Regionally restricted 6B Expression is present in the aortic arch.
TS17: 1st branchial arch mesenchyme Strong 6B
TS17: neural tube Present Non-Uniform 6B Expression is stronger in the ependymal layer, where mitotic activity is high, than in the internal (migrating) neuroepithelium of the mantle.
TS17: telencephalon Present Non-Uniform 6B Expression is stronger in the ependymal layer, where mitotic activity is high, than in the internal (migrating) neuroepithelium of the mantle.
TS17: head Strong Regionally restricted 6B Expression is present in the ectodermal mesenchyme of the developing skull, particularly in the region of the nasal process and the sinuses.

Specimen Not shown: embryonic day 10.5 (more )
Structure Level Pattern Image Note
TS17: cardiac muscle tissue Present

Specimen 6C--top: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: arch of aorta Strong 6C top

Specimen 6C--bottom: embryonic day 12.5 (more )
Note: This is a transverse section.
Structure Level Pattern Image Note
TS20: dorsal root ganglion Strong 6C bottom

Specimen Not shown: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: cranial ganglion Strong
TS20: trigeminal ganglion Strong

Specimen Not shown: embryonic day 13.5 (more )
Structure Level Pattern Image Note
TS21: gut mesenchyme Strong Expression is present in the smooth muscle layer (muscularis) of the gastrointestinal tract.
TS21: vertebral cartilage condensation Strong There is a strong signal from cephalic to caudal regions.
TS21: rib cartilage condensation Strong
TS21: diaphragm Strong

Specimen Not shown: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: Meckel's cartilage Present
TS22: adrenal medulla Strong
TS22: adrenal cortex Ambiguous Expression is weak to absent.

Specimen 6D: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: spinal ganglion Present 6D
TS24: cricoid cartilage Present 6D
TS24: cervical vertebra Present Regionally restricted 6D Expression is confined to the prechondrocytes at the periphery.
TS24: rib Present Regionally restricted 6D Expression is confined to the prechondrocytes at the periphery.

Specimen 6E: embryonic day 16.5 (more )
Note: This is a midsagittal section.
Structure Level Pattern Image Note
TS24: thoracic aorta Strong 6E
TS24: thyroid cartilage Strong 6E
TS24: rib Present Regionally restricted 6E Expression is confined to the prechondrocytes at the periphery.
TS24: vertebra Present Regionally restricted 6E Expression is confined to the prechondrocytes at the periphery.

Specimen Not shown: embryonic day 16.5 (more )
Structure Level Pattern Image Note
TS24: hyoid Strong There is strong expression in the cartilage.
TS24: trachea cartilaginous ring Strong

Specimen 6F: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: metanephros Present 6F
TS25: ureter Present 6F
TS25: adrenal medulla Strong 6F
TS25: adrenal cortex Ambiguous 6F Expression is weak to absent.

Specimen Not shown: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: brain ventricular layer Present Regionally restricted Expression is present in a thin line at the junction of the ventricular walls.
TS25: central nervous system Present Within the neuroepithelium the signal is localized over individual neural cells.
TS25: hyoid Strong There is strong expression in the cartilage.
TS25: cricoid cartilage Strong
TS25: thyroid cartilage Strong
TS25: trachea cartilaginous ring Strong

Specimen Not shown: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: intestine mesenchyme Present Non-Uniform Expression is present in the mucosa and lamina propria, although less intense than in the muscularis.

Specimen Not shown: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: trunk sclerotome Strong There is a strong signal associated with the mesenchymal cells forming individual sclerotomes.

Specimen Not shown: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: cervical vertebral cartilage condensation Present

Specimen 7A: embryonic day 12.5 (more )
Note: This is a sagittal section.
Structure Level Pattern Image Note
TS20: vertebral cartilage condensation Present 7A dark field , 7A bright field Expression is present in the early cartilage condensation of the sclerotome/vertebrae.
TS20: lung mesenchyme Strong 7A bright field , 7A dark field Expression is present in the pulmonary mesenchyme induced by the bronchial epithelium.
TS20: lung epithelium Present 7A dark field , 7A bright field Expression levels are much weaker than those seen in the condensing mesenchyme.

Specimen 7B: embryonic day 12.5 (more )
Structure Level Pattern Image Note
TS20: metanephros Strong 7B dark field , 7B bright field There is strong expression in the condensing metanephric blastema, with more intense signal immediately surrounding the ureteric buds.

Specimen 7C: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: salivary gland mesenchyme Strong 7C bright field , 7C dark field There is strong expression in the condensing salivary gland mesenchyme.
TS22: salivary gland epithelium Present 7C dark field , 7C bright field Expression levels are much weaker than those seen in the condensing mesenchyme.

Specimen 7D: embryonic day 17.5 (more )
Structure Level Pattern Image Note
TS25: hindlimb mesenchyme Strong Regionally restricted 7D dark field , 7D bright field There is strong expression in the early cartilage condensation in the hindlimb.

Specimen 7E: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: dermis Strong Non-Uniform 7E dark field , 7E bright field A particularly strong signal is seen in the dermis surrounding the developing hair follicles, especially the nasal region.
TS26: epidermis Absent 7E dark field , 7E bright field

Specimen Not shown: embryonic day 18.5 (more )
Structure Level Pattern Image Note
TS26: lung epithelium Strong There is strong expression in the maturing pulmonary epithelium.
TS26: lung Present Expression is present in the developing intraparenchymal vessel walls, with particularly intense signal in the outer adventitial layer.

Specimen 8A: embryonic day 17.5 (more )
Note: This is a sagittal section.
Structure Level Pattern Image Note
TS25: nephrogenic zone Strong Regionally restricted 8A Expression is present in the cortical nephrogenic zone.
TS25: renal medulla Present Regionally restricted 8A Expression is weaker in the medullary interstitium than in the cortex.
TS25: medullary tubule Present 8A
TS25: ureter Strong Regionally restricted 8A The strongest expression is present in the urothelium.
TS25: renal pelvis Present 8A
TS25: metanephros Strong Regionally restricted 8A Strong expression is present in the walls of the larger renal vessels.

Specimen 8B: postnatal day 1.5-4.5 (more )
Note: This is a lateral section.
Structure Level Pattern Image Note
TS27: nephrogenic zone Present Non-Uniform 8B Stronger expression is present in the nephrogenic zone, with lesser signal present in more mature inner cortex.
TS27: renal cortex Present Non-Uniform 8B Stronger expression is present in the nephrogenic zone, with lesser signal present in more mature inner cortex.
TS27: glomerular tuft Present 8B


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last database update
06/12/2024
MGI 6.13
The Jackson Laboratory