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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4823904
Gene symbol: Cldn1
Gene name: claudin 1
Probe: MGC clone 5767
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_004814_01: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_004814_01
TS23: choroid plexus Present euxassay_004814_01
TS23: epidermis Moderate Regionally restricted euxassay_004814_01
Specimen euxassay_004814_02: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_004814_02
TS23: choroid plexus Present euxassay_004814_02
TS23: epidermis Moderate Regionally restricted euxassay_004814_02
Specimen euxassay_004814_03: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_004814_03
TS23: choroid plexus Present euxassay_004814_03
TS23: epidermis Moderate Regionally restricted euxassay_004814_03
Specimen euxassay_004814_04: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_004814_04
TS23: choroid plexus Present euxassay_004814_04
TS23: epidermis Moderate Regionally restricted euxassay_004814_04
TS23: axial skeleton cervical region Weak Regionally restricted euxassay_004814_04
TS23: axial skeleton thoracic region Weak Regionally restricted euxassay_004814_04
Specimen euxassay_004814_05: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_004814_05
TS23: choroid plexus Present euxassay_004814_05
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_004814_05
TS23: epidermis Moderate Regionally restricted euxassay_004814_05
TS23: vibrissa Moderate Regionally restricted euxassay_004814_05
TS23: submandibular gland primordium Weak Regionally restricted euxassay_004814_05
TS23: axial skeleton lumbar region Weak Regionally restricted euxassay_004814_05
TS23: renal calyx Weak Regionally restricted euxassay_004814_05
Specimen euxassay_004814_06: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_004814_06
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_004814_06
TS23: choroid plexus Present euxassay_004814_06
TS23: epidermis Moderate Regionally restricted euxassay_004814_06
TS23: vibrissa Moderate Regionally restricted euxassay_004814_06
TS23: submandibular gland primordium Weak Regionally restricted euxassay_004814_06
TS23: axial skeleton lumbar region Weak Regionally restricted euxassay_004814_06
TS23: axial skeleton thoracic region Weak Regionally restricted euxassay_004814_06
TS23: renal calyx Weak Regionally restricted euxassay_004814_06
Specimen euxassay_004814_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_004814_07
TS23: choroid plexus Present euxassay_004814_07
TS23: epidermis Moderate Regionally restricted euxassay_004814_07
TS23: vibrissa Moderate Regionally restricted euxassay_004814_07
TS23: axial skeleton lumbar region Weak Regionally restricted euxassay_004814_07
TS23: axial skeleton thoracic region Weak Regionally restricted euxassay_004814_07
TS23: axial skeleton cervical region Weak Regionally restricted euxassay_004814_07
TS23: esophagus Weak Regionally restricted euxassay_004814_07
Specimen euxassay_004814_08: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_004814_08
TS23: choroid plexus Present euxassay_004814_08
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_004814_08
TS23: epidermis Moderate Regionally restricted euxassay_004814_08
TS23: vibrissa Moderate Regionally restricted euxassay_004814_08
TS23: axial skeleton lumbar region Weak Regionally restricted euxassay_004814_08
TS23: axial skeleton sacral region Weak Regionally restricted euxassay_004814_08
TS23: esophagus Weak Regionally restricted euxassay_004814_08
Specimen euxassay_004814_09: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_004814_09
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_004814_09
TS23: choroid plexus Present euxassay_004814_09
TS23: epidermis Moderate Regionally restricted euxassay_004814_09
TS23: tongue muscle Weak Regionally restricted euxassay_004814_09
TS23: axial skeleton sacral region Weak Regionally restricted euxassay_004814_09
TS23: axial skeleton lumbar region Weak Regionally restricted euxassay_004814_09
TS23: lower jaw incisor Moderate Regionally restricted euxassay_004814_09
Specimen euxassay_004814_10: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_004814_10
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_004814_10
TS23: choroid plexus Present euxassay_004814_10
TS23: epidermis Moderate Regionally restricted euxassay_004814_10
TS23: tongue muscle Weak Regionally restricted euxassay_004814_10
TS23: axial skeleton cervical region Weak Regionally restricted euxassay_004814_10
TS23: axial skeleton sacral region Weak Regionally restricted euxassay_004814_10
TS23: lower jaw incisor Moderate Regionally restricted euxassay_004814_10
TS23: upper jaw incisor Moderate Regionally restricted euxassay_004814_10
Specimen euxassay_004814_11: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_004814_11
TS23: choroid plexus Present euxassay_004814_11
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_004814_11
TS23: epidermis Moderate Regionally restricted euxassay_004814_11
TS23: tongue muscle Weak Regionally restricted euxassay_004814_11
TS23: axial skeleton cervical region Weak Regionally restricted euxassay_004814_11
TS23: axial skeleton sacral region Weak Regionally restricted euxassay_004814_11
TS23: renal calyx Weak Regionally restricted euxassay_004814_11
Specimen euxassay_004814_12: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_004814_12
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_004814_12
TS23: choroid plexus Present euxassay_004814_12
TS23: epidermis Moderate Regionally restricted euxassay_004814_12
TS23: submandibular gland primordium Weak Regionally restricted euxassay_004814_12
TS23: tongue muscle Weak Regionally restricted euxassay_004814_12
TS23: axial skeleton sacral region Weak Regionally restricted euxassay_004814_12
TS23: renal calyx Moderate Regionally restricted euxassay_004814_12
Specimen euxassay_004814_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_004814_13
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_004814_13
TS23: choroid plexus Present euxassay_004814_13
TS23: epidermis Moderate Regionally restricted euxassay_004814_13
TS23: submandibular gland primordium Weak Regionally restricted euxassay_004814_13
TS23: tongue muscle Weak Regionally restricted euxassay_004814_13
TS23: lower jaw incisor Moderate Regionally restricted euxassay_004814_13
TS23: renal calyx Moderate Regionally restricted euxassay_004814_13
Specimen euxassay_004814_14: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_004814_14
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_004814_14
TS23: choroid plexus Present euxassay_004814_14
TS23: epidermis Moderate Regionally restricted euxassay_004814_14
TS23: submandibular gland primordium Weak Regionally restricted euxassay_004814_14
TS23: tongue Weak Regionally restricted euxassay_004814_14
TS23: lower jaw incisor Moderate Regionally restricted euxassay_004814_14
TS23: upper jaw incisor Moderate Regionally restricted euxassay_004814_14
Specimen euxassay_004814_15: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_004814_15
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_004814_15
TS23: choroid plexus Present euxassay_004814_15
TS23: epidermis Moderate Regionally restricted euxassay_004814_15
Specimen euxassay_004814_16: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: lateral ventricle choroid plexus Strong Regionally restricted euxassay_004814_16
TS23: 4th ventricle lateral recess Strong Regionally restricted euxassay_004814_16
TS23: choroid plexus Present euxassay_004814_16
TS23: epidermis Moderate Regionally restricted euxassay_004814_16
Specimen euxassay_004814_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_004814_17
Specimen euxassay_004814_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_004814_18
TS23: epidermis Moderate Regionally restricted euxassay_004814_18
Specimen euxassay_004814_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_004814_19
TS23: vibrissa Moderate Regionally restricted euxassay_004814_19
Specimen euxassay_004814_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_004814_20
TS23: vibrissa Moderate Regionally restricted euxassay_004814_20
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
09/17/2024
MGI 6.24 		The Jackson Laboratory