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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824081
Gene symbol: Csmd3
Gene name: CUB and Sushi multiple domains 3
Probe: T39579
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_013996_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013996_04
Specimen euxassay_013996_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013996_05
Specimen euxassay_013996_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013996_06
TS23: pons mantle layer Moderate Regionally restricted euxassay_013996_06
Specimen euxassay_013996_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013996_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_013996_07
TS23: heart ventricle Moderate Spotted euxassay_013996_07
Specimen euxassay_013996_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013996_08
TS23: pons mantle layer Weak Regionally restricted euxassay_013996_08
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013996_08
TS23: heart ventricle Strong Spotted euxassay_013996_08
Specimen euxassay_013996_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013996_09
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013996_09
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_013996_09
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_013996_09
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_013996_09
TS23: pons mantle layer Moderate Regionally restricted euxassay_013996_09
TS23: heart ventricle Strong Spotted euxassay_013996_09
Specimen euxassay_013996_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013996_10
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013996_10
TS23: midbrain tegmentum Moderate Regionally restricted euxassay_013996_10
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_013996_10
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_013996_10
TS23: pons mantle layer Moderate Regionally restricted euxassay_013996_10
TS23: heart ventricle Strong Spotted euxassay_013996_10
Specimen euxassay_013996_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013996_11
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013996_11
TS23: midbrain tegmentum Moderate Regionally restricted euxassay_013996_11
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_013996_11
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_013996_11
TS23: pons mantle layer Moderate Regionally restricted euxassay_013996_11
TS23: heart ventricle Strong Spotted euxassay_013996_11
Specimen euxassay_013996_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013996_12
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013996_12
TS23: midbrain tegmentum Moderate Regionally restricted euxassay_013996_12
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_013996_12
TS23: pons mantle layer Weak Regionally restricted euxassay_013996_12
TS23: heart ventricle Moderate Spotted euxassay_013996_12
Specimen euxassay_013996_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013996_13
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013996_13
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_013996_13
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_013996_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_013996_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_013996_13
TS23: heart ventricle Moderate Spotted euxassay_013996_13
Specimen euxassay_013996_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013996_14
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013996_14
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_013996_14
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_013996_14
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_013996_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_013996_14
TS23: heart ventricle Moderate Spotted euxassay_013996_14
Specimen euxassay_013996_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013996_15
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013996_15
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_013996_15
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_013996_15
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_013996_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_013996_15
TS23: heart ventricle Moderate Spotted euxassay_013996_15
Specimen euxassay_013996_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013996_16
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013996_16
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_013996_16
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_013996_16
TS23: pons mantle layer Weak Regionally restricted euxassay_013996_16
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013996_16
Specimen euxassay_013996_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_013996_17
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013996_17
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_013996_17
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_013996_17
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_013996_17
TS23: pons mantle layer Moderate Regionally restricted euxassay_013996_17
Specimen euxassay_013996_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013996_18
TS23: midbrain mantle layer Moderate Regionally restricted euxassay_013996_18
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_013996_18
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_013996_18
TS23: pons mantle layer Moderate Regionally restricted euxassay_013996_18
Specimen euxassay_013996_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013996_19
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_013996_19
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_013996_19
TS23: pons mantle layer Moderate Regionally restricted euxassay_013996_19
Specimen euxassay_013996_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013996_20
Specimen euxassay_013996_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Moderate Regionally restricted euxassay_013996_21
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory