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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824303
Gene symbol: Dhx9
Gene name: DExH-box helicase 9
Probe: T36283
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_010959_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_010959_01
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010959_01
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_010959_01
TS23: retina Strong Regionally restricted euxassay_010959_01
TS23: left lung Strong Regionally restricted euxassay_010959_01
TS23: stomach Strong Regionally restricted euxassay_010959_01
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_010959_01
Specimen euxassay_010959_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_010959_02
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010959_02
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_010959_02
TS23: retina Strong Regionally restricted euxassay_010959_02
TS23: left lung Strong Regionally restricted euxassay_010959_02
TS23: stomach Strong Regionally restricted euxassay_010959_02
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_010959_02
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010959_02
Specimen euxassay_010959_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_010959_03
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010959_03
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_010959_03
TS23: retina Strong Regionally restricted euxassay_010959_03
TS23: vibrissa Moderate Regionally restricted euxassay_010959_03
TS23: left lung Strong Regionally restricted euxassay_010959_03
TS23: stomach Strong Regionally restricted euxassay_010959_03
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_010959_03
TS23: utricle Strong Regionally restricted euxassay_010959_03
TS23: cochlea Strong Regionally restricted euxassay_010959_03
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010959_03
TS23: facial ganglion Moderate Regionally restricted euxassay_010959_03
Specimen euxassay_010959_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010959_04
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010959_04
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_010959_04
TS23: retina Strong Regionally restricted euxassay_010959_04
TS23: vibrissa Moderate Regionally restricted euxassay_010959_04
TS23: left lung Strong Regionally restricted euxassay_010959_04
TS23: stomach Strong Regionally restricted euxassay_010959_04
TS23: utricle Strong Regionally restricted euxassay_010959_04
TS23: cochlea Strong Regionally restricted euxassay_010959_04
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010959_04
TS23: facial ganglion Moderate Regionally restricted euxassay_010959_04
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010959_04
Specimen euxassay_010959_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010959_05
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010959_05
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_010959_05
TS23: vibrissa Strong Regionally restricted euxassay_010959_05
TS23: submandibular gland primordium Strong Regionally restricted euxassay_010959_05
TS23: left lung Strong Regionally restricted euxassay_010959_05
TS23: stomach Strong Regionally restricted euxassay_010959_05
TS23: utricle Strong Regionally restricted euxassay_010959_05
TS23: cochlea Strong Regionally restricted euxassay_010959_05
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010959_05
TS23: facial ganglion Moderate Regionally restricted euxassay_010959_05
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010959_05
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_010959_05
Specimen euxassay_010959_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010959_06
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010959_06
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_010959_06
TS23: vibrissa Strong Regionally restricted euxassay_010959_06
TS23: upper jaw molar Strong Regionally restricted euxassay_010959_06
TS23: lower jaw molar Strong Regionally restricted euxassay_010959_06
TS23: submandibular gland primordium Strong Regionally restricted euxassay_010959_06
TS23: left lung Strong Regionally restricted euxassay_010959_06
TS23: metanephros Strong Regionally restricted euxassay_010959_06
TS23: stomach Strong Regionally restricted euxassay_010959_06
TS23: utricle Strong Regionally restricted euxassay_010959_06
TS23: cochlea Strong Regionally restricted euxassay_010959_06
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010959_06
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_010959_06
TS23: vagus ganglion Moderate Regionally restricted euxassay_010959_06
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010959_06
Specimen euxassay_010959_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010959_07
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010959_07
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_010959_07
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_010959_07
TS23: vibrissa Strong Regionally restricted euxassay_010959_07
TS23: olfactory epithelium Strong Regionally restricted euxassay_010959_07
TS23: upper jaw molar Strong Regionally restricted euxassay_010959_07
TS23: lower jaw molar Strong Regionally restricted euxassay_010959_07
TS23: submandibular gland primordium Strong Regionally restricted euxassay_010959_07
TS23: left lung Strong Regionally restricted euxassay_010959_07
TS23: metanephros Strong Regionally restricted euxassay_010959_07
TS23: stomach Strong Regionally restricted euxassay_010959_07
TS23: utricle Strong Regionally restricted euxassay_010959_07
TS23: cochlea Strong Regionally restricted euxassay_010959_07
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010959_07
TS23: vagus ganglion Moderate Regionally restricted euxassay_010959_07
Specimen euxassay_010959_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010959_08
TS23: spinal cord Moderate Regionally restricted euxassay_010959_08
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010959_08
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_010959_08
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_010959_08
TS23: vibrissa Strong Regionally restricted euxassay_010959_08
TS23: olfactory epithelium Strong Regionally restricted euxassay_010959_08
TS23: submandibular gland primordium Strong Regionally restricted euxassay_010959_08
TS23: left lung Strong Regionally restricted euxassay_010959_08
TS23: metanephros Strong Regionally restricted euxassay_010959_08
TS23: pancreas Strong Regionally restricted euxassay_010959_08
TS23: stomach Strong Regionally restricted euxassay_010959_08
TS23: cochlea Strong Regionally restricted euxassay_010959_08
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010959_08
TS23: vagus ganglion Moderate Regionally restricted euxassay_010959_08
Specimen euxassay_010959_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010959_09
TS23: spinal cord Moderate Regionally restricted euxassay_010959_09
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010959_09
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_010959_09
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_010959_09
TS23: vibrissa Strong Regionally restricted euxassay_010959_09
TS23: olfactory epithelium Strong Regionally restricted euxassay_010959_09
TS23: sublingual gland primordium Strong Regionally restricted euxassay_010959_09
TS23: thyroid gland Strong Regionally restricted euxassay_010959_09
TS23: left lung Strong Regionally restricted euxassay_010959_09
TS23: metanephros Strong Regionally restricted euxassay_010959_09
TS23: pancreas Strong Regionally restricted euxassay_010959_09
TS23: midgut Strong Regionally restricted euxassay_010959_09
TS23: stomach Strong Regionally restricted euxassay_010959_09
Specimen euxassay_010959_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010959_10
TS23: spinal cord Moderate Regionally restricted euxassay_010959_10
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010959_10
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_010959_10
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_010959_10
TS23: olfactory epithelium Strong Regionally restricted euxassay_010959_10
TS23: lower jaw incisor Strong Regionally restricted euxassay_010959_10
TS23: upper jaw incisor Strong Regionally restricted euxassay_010959_10
TS23: thyroid gland Strong Regionally restricted euxassay_010959_10
TS23: thymus primordium Strong Regionally restricted euxassay_010959_10
TS23: left lung Strong Regionally restricted euxassay_010959_10
TS23: metanephros Strong Regionally restricted euxassay_010959_10
TS23: pancreas Strong Regionally restricted euxassay_010959_10
TS23: midgut Strong Regionally restricted euxassay_010959_10
Specimen euxassay_010959_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010959_11
TS23: spinal cord Moderate Regionally restricted euxassay_010959_11
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010959_11
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_010959_11
TS23: olfactory epithelium Strong Regionally restricted euxassay_010959_11
TS23: lower jaw incisor Strong Regionally restricted euxassay_010959_11
TS23: upper jaw incisor Strong Regionally restricted euxassay_010959_11
TS23: thymus primordium Strong Regionally restricted euxassay_010959_11
TS23: left lung Strong Regionally restricted euxassay_010959_11
TS23: metanephros Strong Regionally restricted euxassay_010959_11
TS23: pancreas Strong Regionally restricted euxassay_010959_11
TS23: midgut Moderate Regionally restricted euxassay_010959_11
Specimen euxassay_010959_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010959_12
TS23: spinal cord Moderate Regionally restricted euxassay_010959_12
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010959_12
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_010959_12
TS23: olfactory epithelium Strong Regionally restricted euxassay_010959_12
TS23: vomeronasal organ epithelium Strong Regionally restricted euxassay_010959_12
TS23: upper jaw incisor Strong Regionally restricted euxassay_010959_12
TS23: thymus primordium Strong Regionally restricted euxassay_010959_12
TS23: left lung Strong Regionally restricted euxassay_010959_12
TS23: pancreas Moderate Regionally restricted euxassay_010959_12
TS23: midgut Moderate Regionally restricted euxassay_010959_12
Specimen euxassay_010959_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010959_13
TS23: spinal cord Moderate Regionally restricted euxassay_010959_13
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010959_13
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_010959_13
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_010959_13
TS23: olfactory epithelium Strong Regionally restricted euxassay_010959_13
TS23: thymus primordium Strong Regionally restricted euxassay_010959_13
TS23: right lung Strong Regionally restricted euxassay_010959_13
TS23: midgut Strong Regionally restricted euxassay_010959_13
Specimen euxassay_010959_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010959_14
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_010959_14
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_010959_14
TS23: olfactory epithelium Strong Regionally restricted euxassay_010959_14
TS23: vomeronasal organ epithelium Strong Regionally restricted euxassay_010959_14
TS23: lower jaw incisor Strong Regionally restricted euxassay_010959_14
TS23: upper jaw incisor Strong Regionally restricted euxassay_010959_14
TS23: thyroid gland Strong Regionally restricted euxassay_010959_14
TS23: thymus primordium Strong Regionally restricted euxassay_010959_14
TS23: right lung Strong Regionally restricted euxassay_010959_14
TS23: midgut Strong Regionally restricted euxassay_010959_14
Specimen euxassay_010959_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010959_15
TS23: spinal cord Moderate Regionally restricted euxassay_010959_15
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_010959_15
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010959_15
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_010959_15
TS23: olfactory epithelium Strong Regionally restricted euxassay_010959_15
TS23: lower jaw incisor Strong Regionally restricted euxassay_010959_15
TS23: upper jaw incisor Strong Regionally restricted euxassay_010959_15
TS23: sublingual gland primordium Strong Regionally restricted euxassay_010959_15
TS23: thyroid gland Strong Regionally restricted euxassay_010959_15
TS23: right lung Strong Regionally restricted euxassay_010959_15
TS23: pancreas Moderate Regionally restricted euxassay_010959_15
TS23: midgut Strong Regionally restricted euxassay_010959_15
Specimen euxassay_010959_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Moderate Regionally restricted euxassay_010959_16
TS23: spinal cord Moderate Regionally restricted euxassay_010959_16
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010959_16
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_010959_16
TS23: olfactory epithelium Strong Regionally restricted euxassay_010959_16
TS23: upper jaw incisor Strong Regionally restricted euxassay_010959_16
TS23: submandibular gland primordium Strong Regionally restricted euxassay_010959_16
TS23: right lung Strong Regionally restricted euxassay_010959_16
TS23: metanephros Strong Regionally restricted euxassay_010959_16
TS23: pancreas Moderate Regionally restricted euxassay_010959_16
TS23: midgut Strong Regionally restricted euxassay_010959_16
TS23: cochlea Strong Regionally restricted euxassay_010959_16
Specimen euxassay_010959_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_010959_17
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010959_17
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_010959_17
TS23: olfactory epithelium Strong Regionally restricted euxassay_010959_17
TS23: submandibular gland primordium Strong Regionally restricted euxassay_010959_17
TS23: right lung Strong Regionally restricted euxassay_010959_17
TS23: metanephros Strong Regionally restricted euxassay_010959_17
TS23: pancreas Strong Regionally restricted euxassay_010959_17
TS23: midgut Strong Regionally restricted euxassay_010959_17
TS23: cochlea Strong Regionally restricted euxassay_010959_17
TS23: utricle Strong Regionally restricted euxassay_010959_17
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010959_17
TS23: vagus ganglion Moderate Regionally restricted euxassay_010959_17
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_010959_17
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010959_17
Specimen euxassay_010959_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_010959_18
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010959_18
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_010959_18
TS23: olfactory epithelium Strong Regionally restricted euxassay_010959_18
TS23: lower jaw molar Strong Regionally restricted euxassay_010959_18
TS23: upper jaw molar Strong Regionally restricted euxassay_010959_18
TS23: submandibular gland primordium Strong Regionally restricted euxassay_010959_18
TS23: right lung Strong Regionally restricted euxassay_010959_18
TS23: metanephros Strong Regionally restricted euxassay_010959_18
TS23: pancreas Strong Regionally restricted euxassay_010959_18
TS23: midgut Strong Regionally restricted euxassay_010959_18
TS23: cochlea Strong Regionally restricted euxassay_010959_18
TS23: utricle Strong Regionally restricted euxassay_010959_18
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010959_18
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010959_18
TS23: glossopharyngeal ganglion Moderate Regionally restricted euxassay_010959_18
Specimen euxassay_010959_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_010959_19
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010959_19
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_010959_19
TS23: vibrissa Strong Regionally restricted euxassay_010959_19
TS23: olfactory epithelium Strong Regionally restricted euxassay_010959_19
TS23: lower jaw molar Strong Regionally restricted euxassay_010959_19
TS23: upper jaw molar Strong Regionally restricted euxassay_010959_19
TS23: submandibular gland primordium Strong Regionally restricted euxassay_010959_19
TS23: right lung Strong Regionally restricted euxassay_010959_19
TS23: metanephros Strong Regionally restricted euxassay_010959_19
TS23: midgut Strong Regionally restricted euxassay_010959_19
TS23: cochlea Strong Regionally restricted euxassay_010959_19
TS23: utricle Strong Regionally restricted euxassay_010959_19
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010959_19
TS23: facial ganglion Moderate Regionally restricted euxassay_010959_19
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010959_19
Specimen euxassay_010959_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_010959_20
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010959_20
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_010959_20
TS23: vibrissa Strong Regionally restricted euxassay_010959_20
TS23: right lung Strong Regionally restricted euxassay_010959_20
TS23: metanephros Strong Regionally restricted euxassay_010959_20
TS23: midgut Strong Regionally restricted euxassay_010959_20
TS23: cochlea Strong Regionally restricted euxassay_010959_20
TS23: utricle Strong Regionally restricted euxassay_010959_20
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010959_20
TS23: facial ganglion Moderate Regionally restricted euxassay_010959_20
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010959_20
Specimen euxassay_010959_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_010959_21
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010959_21
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_010959_21
TS23: vibrissa Strong Regionally restricted euxassay_010959_21
TS23: right lung Strong Regionally restricted euxassay_010959_21
TS23: metanephros Strong Regionally restricted euxassay_010959_21
TS23: midgut Strong Regionally restricted euxassay_010959_21
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_010959_21
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010959_21
TS23: vestibulo-cochlear ganglion Moderate Regionally restricted euxassay_010959_21
TS23: facial ganglion Moderate Regionally restricted euxassay_010959_21
Specimen euxassay_010959_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_010959_22
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010959_22
TS23: retina Strong Regionally restricted euxassay_010959_22
TS23: vibrissa Moderate Regionally restricted euxassay_010959_22
TS23: right lung Strong Regionally restricted euxassay_010959_22
TS23: midgut Strong Regionally restricted euxassay_010959_22
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_010959_22
TS23: trigeminal ganglion Moderate Regionally restricted euxassay_010959_22
Specimen euxassay_010959_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_010959_23
TS23: telencephalon ventricular layer Strong Regionally restricted euxassay_010959_23
TS23: retina Strong Regionally restricted euxassay_010959_23
TS23: vibrissa Moderate Regionally restricted euxassay_010959_23
TS23: right lung Strong Regionally restricted euxassay_010959_23
TS23: midgut Strong Regionally restricted euxassay_010959_23
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_010959_23
Specimen euxassay_010959_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: brain Strong Regionally restricted euxassay_010959_24
TS23: retina Strong Regionally restricted euxassay_010959_24
TS23: vibrissa Moderate Regionally restricted euxassay_010959_24
TS23: right lung Strong Regionally restricted euxassay_010959_24
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_010959_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
06/12/2024
MGI 6.13 		The Jackson Laboratory