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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824581
Gene symbol: Epha3
Gene name: Eph receptor A3
Probe: T50366
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_018957_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_018957_01
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_018957_01
TS23: pectoral girdle and thoracic body wall musculature Weak Regionally restricted euxassay_018957_01
Specimen euxassay_018957_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_018957_02
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_018957_02
TS23: pectoral girdle and thoracic body wall musculature Weak Regionally restricted euxassay_018957_02
TS23: cranial musculature Weak Regionally restricted euxassay_018957_02
Specimen euxassay_018957_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_018957_03
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_018957_03
TS23: pectoral girdle and thoracic body wall musculature Weak Regionally restricted euxassay_018957_03
TS23: foot mesenchyme Weak Regionally restricted euxassay_018957_03
TS23: cranial musculature Weak Regionally restricted euxassay_018957_03
Specimen euxassay_018957_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_018957_04
TS23: vibrissa Weak Regionally restricted euxassay_018957_04
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_018957_04
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_018957_04
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_018957_04
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_018957_04
TS23: pectoral girdle and thoracic body wall musculature Weak Regionally restricted euxassay_018957_04
TS23: foot mesenchyme Weak Regionally restricted euxassay_018957_04
TS23: cranial musculature Weak Regionally restricted euxassay_018957_04
Specimen euxassay_018957_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_018957_05
TS23: vibrissa Weak Regionally restricted euxassay_018957_05
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_018957_05
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_018957_05
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_018957_05
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_018957_05
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_018957_05
TS23: pectoral girdle and thoracic body wall musculature Weak Regionally restricted euxassay_018957_05
TS23: axial musculature Weak Regionally restricted euxassay_018957_05
TS23: foot mesenchyme Weak Regionally restricted euxassay_018957_05
TS23: cranial musculature Weak Regionally restricted euxassay_018957_05
Specimen euxassay_018957_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_018957_06
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_018957_06
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_018957_06
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_018957_06
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_018957_06
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_018957_06
TS23: pectoral girdle and thoracic body wall musculature Weak Regionally restricted euxassay_018957_06
TS23: axial musculature Weak Regionally restricted euxassay_018957_06
TS23: foot mesenchyme Weak Regionally restricted euxassay_018957_06
TS23: palatal shelf Moderate Regionally restricted euxassay_018957_06
Specimen euxassay_018957_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_018957_07
TS23: upper jaw molar Moderate Regionally restricted euxassay_018957_07
TS23: upper jaw incisor Moderate Regionally restricted euxassay_018957_07
TS23: lower jaw molar Moderate Regionally restricted euxassay_018957_07
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_018957_07
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_018957_07
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_018957_07
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_018957_07
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_018957_07
TS23: axial musculature Weak Regionally restricted euxassay_018957_07
TS23: pectoral girdle and thoracic body wall musculature Weak Regionally restricted euxassay_018957_07
TS23: palatal shelf Moderate Regionally restricted euxassay_018957_07
Specimen euxassay_018957_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_018957_08
TS23: upper jaw incisor Moderate Regionally restricted euxassay_018957_08
TS23: upper jaw molar Moderate Regionally restricted euxassay_018957_08
TS23: lower jaw molar Moderate Regionally restricted euxassay_018957_08
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_018957_08
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_018957_08
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_018957_08
TS23: pectoral girdle and thoracic body wall musculature Weak Regionally restricted euxassay_018957_08
TS23: axial musculature Weak Regionally restricted euxassay_018957_08
TS23: palatal shelf Moderate Regionally restricted euxassay_018957_08
Specimen euxassay_018957_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_018957_09
TS23: upper jaw incisor Moderate Regionally restricted euxassay_018957_09
TS23: lower jaw incisor Moderate Regionally restricted euxassay_018957_09
TS23: naris Weak Regionally restricted euxassay_018957_09
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_018957_09
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_018957_09
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_018957_09
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_018957_09
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_018957_09
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_018957_09
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_018957_09
TS23: palatal shelf Moderate Regionally restricted euxassay_018957_09
Specimen euxassay_018957_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: tongue Moderate Regionally restricted euxassay_018957_10
TS23: lung Weak Regionally restricted euxassay_018957_10
TS23: clavicle Weak Regionally restricted euxassay_018957_10
TS23: naris Weak Regionally restricted euxassay_018957_10
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_018957_10
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_018957_10
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_018957_10
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_018957_10
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_018957_10
TS23: palatal shelf Moderate Regionally restricted euxassay_018957_10
Specimen euxassay_018957_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: tongue Moderate Regionally restricted euxassay_018957_11
TS23: lung Weak Regionally restricted euxassay_018957_11
TS23: upper jaw incisor Weak Regionally restricted euxassay_018957_11
TS23: lower jaw incisor Weak Regionally restricted euxassay_018957_11
TS23: clavicle Weak Regionally restricted euxassay_018957_11
TS23: naris Weak Regionally restricted euxassay_018957_11
TS23: tail mesenchyme Moderate Regionally restricted euxassay_018957_11
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_018957_11
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_018957_11
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_018957_11
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_018957_11
TS23: palatal shelf Moderate Regionally restricted euxassay_018957_11
Specimen euxassay_018957_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_018957_12
TS23: lower jaw incisor Weak Regionally restricted euxassay_018957_12
TS23: upper jaw incisor Weak Regionally restricted euxassay_018957_12
TS23: thymus primordium Weak Regionally restricted euxassay_018957_12
TS23: tail mesenchyme Moderate Regionally restricted euxassay_018957_12
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_018957_12
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_018957_12
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_018957_12
TS23: palatal shelf Moderate Regionally restricted euxassay_018957_12
Specimen euxassay_018957_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower jaw incisor Moderate Regionally restricted euxassay_018957_13
TS23: upper jaw incisor Moderate Regionally restricted euxassay_018957_13
TS23: thymus primordium Weak Regionally restricted euxassay_018957_13
TS23: tail mesenchyme Moderate Regionally restricted euxassay_018957_13
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_018957_13
TS23: diencephalon lateral wall ventricular layer Moderate Regionally restricted euxassay_018957_13
TS23: spinal cord floor plate Weak Regionally restricted euxassay_018957_13
Specimen euxassay_018957_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower jaw incisor Weak Regionally restricted euxassay_018957_14
TS23: upper jaw incisor Weak Regionally restricted euxassay_018957_14
TS23: thymus primordium Weak Regionally restricted euxassay_018957_14
TS23: tail mesenchyme Moderate Regionally restricted euxassay_018957_14
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_018957_14
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_018957_14
TS23: rest of cerebellum mantle layer Weak Regionally restricted euxassay_018957_14
TS23: diencephalon lateral wall ventricular layer Weak Regionally restricted euxassay_018957_14
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_018957_14
TS23: spinal cord floor plate Weak Regionally restricted euxassay_018957_14
Specimen euxassay_018957_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: tongue Weak Regionally restricted euxassay_018957_15
TS23: lung Weak Regionally restricted euxassay_018957_15
TS23: lower jaw incisor Moderate Regionally restricted euxassay_018957_15
TS23: upper jaw incisor Moderate Regionally restricted euxassay_018957_15
TS23: thymus primordium Weak Regionally restricted euxassay_018957_15
TS23: tail mesenchyme Moderate Regionally restricted euxassay_018957_15
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_018957_15
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_018957_15
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_018957_15
TS23: diencephalon lateral wall mantle layer Moderate Regionally restricted euxassay_018957_15
TS23: spinal cord floor plate Moderate Regionally restricted euxassay_018957_15
Specimen euxassay_018957_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: tongue Moderate Regionally restricted euxassay_018957_16
TS23: lung Weak Regionally restricted euxassay_018957_16
TS23: upper jaw incisor Weak Regionally restricted euxassay_018957_16
TS23: lower jaw incisor Weak Regionally restricted euxassay_018957_16
TS23: thymus primordium Weak Regionally restricted euxassay_018957_16
TS23: naris Weak Regionally restricted euxassay_018957_16
TS23: tail mesenchyme Moderate Regionally restricted euxassay_018957_16
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_018957_16
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_018957_16
TS23: medulla oblongata basal plate ventricular layer Moderate Regionally restricted euxassay_018957_16
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_018957_16
Specimen euxassay_018957_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: tongue Moderate Regionally restricted euxassay_018957_17
TS23: lung Weak Regionally restricted euxassay_018957_17
TS23: lower jaw incisor Moderate Regionally restricted euxassay_018957_17
TS23: upper jaw incisor Moderate Regionally restricted euxassay_018957_17
TS23: clavicle Weak Regionally restricted euxassay_018957_17
TS23: tail mesenchyme Moderate Regionally restricted euxassay_018957_17
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_018957_17
TS23: olfactory cortex mantle layer Moderate Regionally restricted euxassay_018957_17
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_018957_17
TS23: medulla oblongata basal plate ventricular layer Weak Regionally restricted euxassay_018957_17
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_018957_17
TS23: spinal cord floor plate Moderate Regionally restricted euxassay_018957_17
Specimen euxassay_018957_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_018957_18
TS23: upper jaw molar Moderate Regionally restricted euxassay_018957_18
TS23: upper jaw incisor Moderate Regionally restricted euxassay_018957_18
TS23: lower jaw incisor Moderate Regionally restricted euxassay_018957_18
TS23: clavicle Weak Regionally restricted euxassay_018957_18
TS23: naris Moderate Regionally restricted euxassay_018957_18
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_018957_18
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_018957_18
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_018957_18
TS23: foot mesenchyme Weak Regionally restricted euxassay_018957_18
Specimen euxassay_018957_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_018957_19
TS23: upper jaw incisor Moderate Regionally restricted euxassay_018957_19
TS23: upper jaw molar Moderate Regionally restricted euxassay_018957_19
TS23: lower jaw molar Moderate Regionally restricted euxassay_018957_19
TS23: lower jaw incisor Moderate Regionally restricted euxassay_018957_19
TS23: clavicle Weak Regionally restricted euxassay_018957_19
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_018957_19
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_018957_19
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_018957_19
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_018957_19
TS23: foot mesenchyme Weak Regionally restricted euxassay_018957_19
Specimen euxassay_018957_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_018957_20
TS23: upper jaw incisor Moderate Regionally restricted euxassay_018957_20
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_018957_20
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_018957_20
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_018957_20
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_018957_20
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_018957_20
TS23: foot mesenchyme Weak Regionally restricted euxassay_018957_20
Specimen euxassay_018957_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_018957_21
TS23: vibrissa Weak Regionally restricted euxassay_018957_21
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_018957_21
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_018957_21
TS23: cerebral cortex mantle layer Moderate Regionally restricted euxassay_018957_21
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_018957_21
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_018957_21
TS23: pectoral girdle and thoracic body wall musculature Moderate Regionally restricted euxassay_018957_21
TS23: axial musculature Moderate Regionally restricted euxassay_018957_21
TS23: foot mesenchyme Weak Regionally restricted euxassay_018957_21
Specimen euxassay_018957_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_018957_22
TS23: vibrissa Weak Regionally restricted euxassay_018957_22
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_018957_22
TS23: telencephalon ventricular layer Moderate Regionally restricted euxassay_018957_22
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_018957_22
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_018957_22
TS23: pectoral girdle and thoracic body wall musculature Moderate Regionally restricted euxassay_018957_22
TS23: axial musculature Moderate Regionally restricted euxassay_018957_22
Specimen euxassay_018957_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_018957_23
TS23: vibrissa Weak Regionally restricted euxassay_018957_23
TS23: telencephalon ventricular layer Moderate Uniform euxassay_018957_23
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_018957_23
TS23: rest of cerebellum ventricular layer Weak Regionally restricted euxassay_018957_23
TS23: pectoral girdle and thoracic body wall musculature Moderate Regionally restricted euxassay_018957_23
TS23: axial musculature Moderate Regionally restricted euxassay_018957_23
TS23: cranial musculature Moderate Regionally restricted euxassay_018957_23
Specimen euxassay_018957_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lung Weak Regionally restricted euxassay_018957_24
TS23: pectoral girdle and thoracic body wall musculature Moderate Regionally restricted euxassay_018957_24
TS23: cranial musculature Moderate Regionally restricted euxassay_018957_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
06/12/2024
MGI 6.13 		The Jackson Laboratory