About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824785
Gene symbol: Fat2
Gene name: FAT atypical cadherin 2
Probe: T37838
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_013722_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_02
TS23: stomach Moderate Regionally restricted euxassay_013722_02
Specimen euxassay_013722_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_013722_03
TS23: epidermis Moderate Regionally restricted euxassay_013722_03
TS23: stomach Moderate Regionally restricted euxassay_013722_03
Specimen euxassay_013722_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_04
TS23: stomach Moderate Regionally restricted euxassay_013722_04
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_013722_04
Specimen euxassay_013722_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_05
TS23: vibrissa Moderate Regionally restricted euxassay_013722_05
TS23: stomach Moderate Regionally restricted euxassay_013722_05
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_013722_05
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_05
Specimen euxassay_013722_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_06
TS23: vibrissa Moderate Regionally restricted euxassay_013722_06
TS23: stomach Strong Regionally restricted euxassay_013722_06
TS23: oral epithelium Strong Regionally restricted euxassay_013722_06
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_013722_06
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_06
TS23: diencephalon meninges Strong Regionally restricted euxassay_013722_06
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_06
Specimen euxassay_013722_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_07
TS23: vibrissa Moderate Regionally restricted euxassay_013722_07
TS23: stomach Strong Regionally restricted euxassay_013722_07
TS23: oral epithelium Strong Regionally restricted euxassay_013722_07
TS23: lower jaw molar Moderate Regionally restricted euxassay_013722_07
TS23: upper jaw molar Moderate Regionally restricted euxassay_013722_07
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_013722_07
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_07
TS23: diencephalon meninges Strong Regionally restricted euxassay_013722_07
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_07
Specimen euxassay_013722_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_08
TS23: vibrissa Moderate Regionally restricted euxassay_013722_08
TS23: oral epithelium Strong Regionally restricted euxassay_013722_08
TS23: lower jaw molar Moderate Regionally restricted euxassay_013722_08
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_013722_08
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_013722_08
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_08
TS23: diencephalon meninges Strong Regionally restricted euxassay_013722_08
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_08
Specimen euxassay_013722_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_09
TS23: stomach Strong Regionally restricted euxassay_013722_09
TS23: lower jaw molar Strong Regionally restricted euxassay_013722_09
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_013722_09
TS23: olfactory epithelium Strong Regionally restricted euxassay_013722_09
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_013722_09
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_09
TS23: diencephalon meninges Strong Regionally restricted euxassay_013722_09
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_09
Specimen euxassay_013722_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_10
TS23: stomach Strong Regionally restricted euxassay_013722_10
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_013722_10
TS23: olfactory epithelium Strong Regionally restricted euxassay_013722_10
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_013722_10
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_10
TS23: diencephalon meninges Strong Regionally restricted euxassay_013722_10
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_10
Specimen euxassay_013722_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_11
TS23: esophagus epithelium Moderate Regionally restricted euxassay_013722_11
TS23: oral epithelium Strong Regionally restricted euxassay_013722_11
TS23: olfactory epithelium Strong Regionally restricted euxassay_013722_11
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_013722_11
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_11
TS23: diencephalon meninges Strong Regionally restricted euxassay_013722_11
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_11
Specimen euxassay_013722_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_12
TS23: esophagus epithelium Moderate Regionally restricted euxassay_013722_12
TS23: oral epithelium Strong Regionally restricted euxassay_013722_12
TS23: olfactory epithelium Strong Regionally restricted euxassay_013722_12
TS23: thyroid gland Weak Regionally restricted euxassay_013722_12
TS23: bladder Moderate Regionally restricted euxassay_013722_12
TS23: urethra Moderate Regionally restricted euxassay_013722_12 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_12
TS23: diencephalon meninges Strong Regionally restricted euxassay_013722_12
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_12
Specimen euxassay_013722_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_13
TS23: esophagus epithelium Moderate Regionally restricted euxassay_013722_13
TS23: pharynx epithelium Moderate Regionally restricted euxassay_013722_13
TS23: oral epithelium Strong Regionally restricted euxassay_013722_13
TS23: lower jaw incisor Strong Regionally restricted euxassay_013722_13
TS23: upper jaw incisor Strong Regionally restricted euxassay_013722_13
TS23: olfactory epithelium Strong Regionally restricted euxassay_013722_13
TS23: external naris epithelium Strong Regionally restricted euxassay_013722_13
TS23: anterior naris epithelium Strong Regionally restricted euxassay_013722_13
TS23: thyroid gland Moderate Regionally restricted euxassay_013722_13
TS23: thymus primordium Moderate Regionally restricted euxassay_013722_13
TS23: bladder Moderate Regionally restricted euxassay_013722_13
TS23: urethra Moderate Regionally restricted euxassay_013722_13 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_13
TS23: diencephalon meninges Strong Regionally restricted euxassay_013722_13
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_13
Specimen euxassay_013722_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_14
TS23: esophagus epithelium Moderate Regionally restricted euxassay_013722_14
TS23: pharynx epithelium Moderate Regionally restricted euxassay_013722_14
TS23: oral epithelium Strong Regionally restricted euxassay_013722_14
TS23: thymus primordium Moderate Regionally restricted euxassay_013722_14
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_14
TS23: diencephalon meninges Strong Regionally restricted euxassay_013722_14
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_14
Specimen euxassay_013722_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_15
TS23: pharynx epithelium Moderate Regionally restricted euxassay_013722_15
TS23: oral epithelium Strong Regionally restricted euxassay_013722_15
TS23: thymus primordium Moderate Regionally restricted euxassay_013722_15
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_15
TS23: diencephalon meninges Strong Regionally restricted euxassay_013722_15
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_15
Specimen euxassay_013722_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_16
TS23: oral epithelium Strong Regionally restricted euxassay_013722_16
TS23: lower jaw incisor Strong Regionally restricted euxassay_013722_16
TS23: olfactory epithelium Moderate Regionally restricted euxassay_013722_16
TS23: thymus primordium Moderate Regionally restricted euxassay_013722_16
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_16
TS23: diencephalon meninges Strong Regionally restricted euxassay_013722_16
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_16
Specimen euxassay_013722_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_17
TS23: oral epithelium Strong Regionally restricted euxassay_013722_17
TS23: lower jaw incisor Strong Regionally restricted euxassay_013722_17
TS23: upper jaw incisor Strong Regionally restricted euxassay_013722_17
TS23: olfactory epithelium Moderate Regionally restricted euxassay_013722_17
TS23: anterior naris epithelium Strong Regionally restricted euxassay_013722_17
TS23: thyroid gland Moderate Regionally restricted euxassay_013722_17
TS23: thymus primordium Moderate Regionally restricted euxassay_013722_17
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_17
TS23: diencephalon meninges Strong Regionally restricted euxassay_013722_17
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_17
Specimen euxassay_013722_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_18
TS23: oral epithelium Strong Regionally restricted euxassay_013722_18
TS23: anterior naris epithelium Moderate Regionally restricted euxassay_013722_18
TS23: external naris epithelium Moderate Regionally restricted euxassay_013722_18
TS23: olfactory epithelium Moderate Regionally restricted euxassay_013722_18
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_013722_18
TS23: thyroid gland Moderate Regionally restricted euxassay_013722_18
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_18
TS23: diencephalon meninges Strong Regionally restricted euxassay_013722_18
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_18
Specimen euxassay_013722_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_19
TS23: oral epithelium Strong Regionally restricted euxassay_013722_19
TS23: olfactory epithelium Moderate Regionally restricted euxassay_013722_19
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_013722_19
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_013722_19
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_19
TS23: diencephalon meninges Strong Regionally restricted euxassay_013722_19
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_19
Specimen euxassay_013722_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_20
TS23: oral epithelium Strong Regionally restricted euxassay_013722_20
TS23: lower jaw molar Strong Regionally restricted euxassay_013722_20
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_013722_20
TS23: olfactory epithelium Strong Regionally restricted euxassay_013722_20
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_013722_20
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_20
TS23: diencephalon meninges Strong Regionally restricted euxassay_013722_20
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_20
Specimen euxassay_013722_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_21
TS23: vibrissa Moderate Regionally restricted euxassay_013722_21
TS23: oral epithelium Strong Regionally restricted euxassay_013722_21
TS23: upper jaw molar Strong Regionally restricted euxassay_013722_21
TS23: lower jaw molar Strong Regionally restricted euxassay_013722_21
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_013722_21
TS23: submandibular gland primordium Strong Regionally restricted euxassay_013722_21
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_21
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_21
Specimen euxassay_013722_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_22
TS23: vibrissa Moderate Regionally restricted euxassay_013722_22
TS23: oral epithelium Strong Regionally restricted euxassay_013722_22
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_013722_22
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_22
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_013722_22
Specimen euxassay_013722_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_23
TS23: vibrissa Moderate Regionally restricted euxassay_013722_23
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_013722_23
Specimen euxassay_013722_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_24
TS23: vibrissa Moderate Regionally restricted euxassay_013722_24
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_013722_24
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory