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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4824785
Gene symbol: Fat2
Gene name: FAT atypical cadherin 2
Probe: T37838
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_013722_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_02
TS23: stomach Moderate Regionally restricted euxassay_013722_02
Specimen euxassay_013722_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_013722_03
TS23: epidermis Moderate Regionally restricted euxassay_013722_03
TS23: stomach Moderate Regionally restricted euxassay_013722_03
Specimen euxassay_013722_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_04
TS23: stomach Moderate Regionally restricted euxassay_013722_04
TS23: rest of cerebellum marginal layer Weak Regionally restricted euxassay_013722_04
Specimen euxassay_013722_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_05
TS23: vibrissa Moderate Regionally restricted euxassay_013722_05
TS23: stomach Moderate Regionally restricted euxassay_013722_05
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_013722_05
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_05
Specimen euxassay_013722_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_06
TS23: vibrissa Moderate Regionally restricted euxassay_013722_06
TS23: stomach Strong Regionally restricted euxassay_013722_06
TS23: oral epithelium Strong Regionally restricted euxassay_013722_06
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_013722_06
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_06
TS23: diencephalon meninges Strong Regionally restricted euxassay_013722_06
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_06
Specimen euxassay_013722_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_07
TS23: vibrissa Moderate Regionally restricted euxassay_013722_07
TS23: stomach Strong Regionally restricted euxassay_013722_07
TS23: oral epithelium Strong Regionally restricted euxassay_013722_07
TS23: lower jaw molar Moderate Regionally restricted euxassay_013722_07
TS23: upper jaw molar Moderate Regionally restricted euxassay_013722_07
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_013722_07
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_07
TS23: diencephalon meninges Strong Regionally restricted euxassay_013722_07
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_07
Specimen euxassay_013722_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_08
TS23: vibrissa Moderate Regionally restricted euxassay_013722_08
TS23: oral epithelium Strong Regionally restricted euxassay_013722_08
TS23: lower jaw molar Moderate Regionally restricted euxassay_013722_08
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_013722_08
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_013722_08
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_08
TS23: diencephalon meninges Strong Regionally restricted euxassay_013722_08
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_08
Specimen euxassay_013722_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_09
TS23: stomach Strong Regionally restricted euxassay_013722_09
TS23: lower jaw molar Strong Regionally restricted euxassay_013722_09
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_013722_09
TS23: olfactory epithelium Strong Regionally restricted euxassay_013722_09
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_013722_09
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_09
TS23: diencephalon meninges Strong Regionally restricted euxassay_013722_09
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_09
Specimen euxassay_013722_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_10
TS23: stomach Strong Regionally restricted euxassay_013722_10
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_013722_10
TS23: olfactory epithelium Strong Regionally restricted euxassay_013722_10
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_013722_10
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_10
TS23: diencephalon meninges Strong Regionally restricted euxassay_013722_10
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_10
Specimen euxassay_013722_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_11
TS23: esophagus epithelium Moderate Regionally restricted euxassay_013722_11
TS23: oral epithelium Strong Regionally restricted euxassay_013722_11
TS23: olfactory epithelium Strong Regionally restricted euxassay_013722_11
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_013722_11
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_11
TS23: diencephalon meninges Strong Regionally restricted euxassay_013722_11
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_11
Specimen euxassay_013722_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_12
TS23: esophagus epithelium Moderate Regionally restricted euxassay_013722_12
TS23: oral epithelium Strong Regionally restricted euxassay_013722_12
TS23: olfactory epithelium Strong Regionally restricted euxassay_013722_12
TS23: thyroid gland Weak Regionally restricted euxassay_013722_12
TS23: bladder Moderate Regionally restricted euxassay_013722_12
TS23: urethra Moderate Regionally restricted euxassay_013722_12 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_12
TS23: diencephalon meninges Strong Regionally restricted euxassay_013722_12
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_12
Specimen euxassay_013722_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_13
TS23: esophagus epithelium Moderate Regionally restricted euxassay_013722_13
TS23: pharynx epithelium Moderate Regionally restricted euxassay_013722_13
TS23: oral epithelium Strong Regionally restricted euxassay_013722_13
TS23: lower jaw incisor Strong Regionally restricted euxassay_013722_13
TS23: upper jaw incisor Strong Regionally restricted euxassay_013722_13
TS23: olfactory epithelium Strong Regionally restricted euxassay_013722_13
TS23: external naris epithelium Strong Regionally restricted euxassay_013722_13
TS23: anterior naris epithelium Strong Regionally restricted euxassay_013722_13
TS23: thyroid gland Moderate Regionally restricted euxassay_013722_13
TS23: thymus primordium Moderate Regionally restricted euxassay_013722_13
TS23: bladder Moderate Regionally restricted euxassay_013722_13
TS23: urethra Moderate Regionally restricted euxassay_013722_13 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_13
TS23: diencephalon meninges Strong Regionally restricted euxassay_013722_13
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_13
Specimen euxassay_013722_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_14
TS23: esophagus epithelium Moderate Regionally restricted euxassay_013722_14
TS23: pharynx epithelium Moderate Regionally restricted euxassay_013722_14
TS23: oral epithelium Strong Regionally restricted euxassay_013722_14
TS23: thymus primordium Moderate Regionally restricted euxassay_013722_14
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_14
TS23: diencephalon meninges Strong Regionally restricted euxassay_013722_14
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_14
Specimen euxassay_013722_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_15
TS23: pharynx epithelium Moderate Regionally restricted euxassay_013722_15
TS23: oral epithelium Strong Regionally restricted euxassay_013722_15
TS23: thymus primordium Moderate Regionally restricted euxassay_013722_15
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_15
TS23: diencephalon meninges Strong Regionally restricted euxassay_013722_15
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_15
Specimen euxassay_013722_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_16
TS23: oral epithelium Strong Regionally restricted euxassay_013722_16
TS23: lower jaw incisor Strong Regionally restricted euxassay_013722_16
TS23: olfactory epithelium Moderate Regionally restricted euxassay_013722_16
TS23: thymus primordium Moderate Regionally restricted euxassay_013722_16
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_16
TS23: diencephalon meninges Strong Regionally restricted euxassay_013722_16
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_16
Specimen euxassay_013722_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_17
TS23: oral epithelium Strong Regionally restricted euxassay_013722_17
TS23: lower jaw incisor Strong Regionally restricted euxassay_013722_17
TS23: upper jaw incisor Strong Regionally restricted euxassay_013722_17
TS23: olfactory epithelium Moderate Regionally restricted euxassay_013722_17
TS23: anterior naris epithelium Strong Regionally restricted euxassay_013722_17
TS23: thyroid gland Moderate Regionally restricted euxassay_013722_17
TS23: thymus primordium Moderate Regionally restricted euxassay_013722_17
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_17
TS23: diencephalon meninges Strong Regionally restricted euxassay_013722_17
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_17
Specimen euxassay_013722_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_18
TS23: oral epithelium Strong Regionally restricted euxassay_013722_18
TS23: anterior naris epithelium Moderate Regionally restricted euxassay_013722_18
TS23: external naris epithelium Moderate Regionally restricted euxassay_013722_18
TS23: olfactory epithelium Moderate Regionally restricted euxassay_013722_18
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_013722_18
TS23: thyroid gland Moderate Regionally restricted euxassay_013722_18
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_18
TS23: diencephalon meninges Strong Regionally restricted euxassay_013722_18
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_18
Specimen euxassay_013722_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_19
TS23: oral epithelium Strong Regionally restricted euxassay_013722_19
TS23: olfactory epithelium Moderate Regionally restricted euxassay_013722_19
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_013722_19
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_013722_19
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_19
TS23: diencephalon meninges Strong Regionally restricted euxassay_013722_19
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_19
Specimen euxassay_013722_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_20
TS23: oral epithelium Strong Regionally restricted euxassay_013722_20
TS23: lower jaw molar Strong Regionally restricted euxassay_013722_20
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_013722_20
TS23: olfactory epithelium Strong Regionally restricted euxassay_013722_20
TS23: submandibular gland primordium Moderate Regionally restricted euxassay_013722_20
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_20
TS23: diencephalon meninges Strong Regionally restricted euxassay_013722_20
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_20
Specimen euxassay_013722_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_21
TS23: vibrissa Moderate Regionally restricted euxassay_013722_21
TS23: oral epithelium Strong Regionally restricted euxassay_013722_21
TS23: upper jaw molar Strong Regionally restricted euxassay_013722_21
TS23: lower jaw molar Strong Regionally restricted euxassay_013722_21
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_013722_21
TS23: submandibular gland primordium Strong Regionally restricted euxassay_013722_21
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_21
TS23: rest of cerebellum marginal layer Strong Regionally restricted euxassay_013722_21
Specimen euxassay_013722_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_22
TS23: vibrissa Moderate Regionally restricted euxassay_013722_22
TS23: oral epithelium Strong Regionally restricted euxassay_013722_22
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_013722_22
TS23: basioccipital bone Strong Regionally restricted euxassay_013722_22
TS23: rest of cerebellum marginal layer Moderate Regionally restricted euxassay_013722_22
Specimen euxassay_013722_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_23
TS23: vibrissa Moderate Regionally restricted euxassay_013722_23
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_013722_23
Specimen euxassay_013722_24: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_013722_24
TS23: vibrissa Moderate Regionally restricted euxassay_013722_24
TS23: naso-lacrimal duct Strong Regionally restricted euxassay_013722_24
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Send questions and comments to User Support. 		last database update
06/12/2024
MGI 6.13 		The Jackson Laboratory