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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4825625
Gene symbol: Irx4
Gene name: Iroquois homeobox 4
Probe: T35471
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_008984_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_008984_01
Specimen euxassay_008984_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_008984_02
Specimen euxassay_008984_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_008984_03
Specimen euxassay_008984_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_008984_04
TS23: vibrissa Moderate Regionally restricted euxassay_008984_04
TS23: pons mantle layer Moderate Regionally restricted euxassay_008984_04
TS23: metencephalon rest of alar plate mantle layer Moderate Regionally restricted euxassay_008984_04
Specimen euxassay_008984_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_008984_05
TS23: vibrissa Moderate Regionally restricted euxassay_008984_05
TS23: pons mantle layer Moderate Regionally restricted euxassay_008984_05
TS23: metencephalon rest of alar plate mantle layer Moderate Regionally restricted euxassay_008984_05
Specimen euxassay_008984_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_008984_06
TS23: vibrissa Moderate Regionally restricted euxassay_008984_06
TS23: pons mantle layer Moderate Regionally restricted euxassay_008984_06
TS23: metencephalon rest of alar plate mantle layer Moderate Regionally restricted euxassay_008984_06
Specimen euxassay_008984_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_008984_07
TS23: vibrissa Moderate Regionally restricted euxassay_008984_07
TS23: pons mantle layer Moderate Regionally restricted euxassay_008984_07
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_008984_07
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_008984_07
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_008984_07
Specimen euxassay_008984_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_008984_08
TS23: pons mantle layer Moderate Regionally restricted euxassay_008984_08
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_008984_08
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_008984_08
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_008984_08
Specimen euxassay_008984_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_008984_09
TS23: upper lip Moderate Regionally restricted euxassay_008984_09
TS23: pons mantle layer Moderate Regionally restricted euxassay_008984_09
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_008984_09
Specimen euxassay_008984_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_008984_10
TS23: upper lip Moderate Regionally restricted euxassay_008984_10
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_008984_10
TS23: heart ventricle Weak Regionally restricted euxassay_008984_10
Specimen euxassay_008984_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_008984_11
TS23: upper lip Moderate Regionally restricted euxassay_008984_11
TS23: pons mantle layer Weak Regionally restricted euxassay_008984_11
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_008984_11
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_008984_11
TS23: spinal cord mantle layer Weak Regionally restricted euxassay_008984_11
TS23: heart ventricle Weak Regionally restricted euxassay_008984_11
Specimen euxassay_008984_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_008984_12
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_008984_12
TS23: pons mantle layer Moderate Regionally restricted euxassay_008984_12
TS23: medulla oblongata alar plate mantle layer Moderate Regionally restricted euxassay_008984_12
TS23: heart ventricle Weak Regionally restricted euxassay_008984_12
Specimen euxassay_008984_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_008984_13
TS23: pons mantle layer Moderate Regionally restricted euxassay_008984_13
TS23: medulla oblongata basal plate mantle layer Moderate Regionally restricted euxassay_008984_13
Specimen euxassay_008984_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_008984_14
TS23: metencephalon rest of alar plate mantle layer Moderate Regionally restricted euxassay_008984_14
TS23: pons mantle layer Moderate Regionally restricted euxassay_008984_14
Specimen euxassay_008984_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_008984_15
TS23: metencephalon rest of alar plate mantle layer Moderate Regionally restricted euxassay_008984_15
TS23: pons mantle layer Moderate Regionally restricted euxassay_008984_15
Specimen euxassay_008984_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_008984_16
TS23: upper lip Moderate Regionally restricted euxassay_008984_16
TS23: metencephalon rest of alar plate mantle layer Moderate Regionally restricted euxassay_008984_16
TS23: pons mantle layer Moderate Regionally restricted euxassay_008984_16
Specimen euxassay_008984_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_008984_17
TS23: upper lip Moderate Regionally restricted euxassay_008984_17
Specimen euxassay_008984_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_008984_18
TS23: upper lip Moderate Regionally restricted euxassay_008984_18
Specimen euxassay_008984_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_008984_19
TS23: upper lip Moderate Regionally restricted euxassay_008984_19
Specimen euxassay_008984_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: epidermis Moderate Regionally restricted euxassay_008984_20
TS23: vibrissa Moderate Regionally restricted euxassay_008984_20
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
09/17/2024
MGI 6.24 		The Jackson Laboratory