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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4826072
Gene symbol: Man1a
Gene name: mannosidase 1, alpha
Probe: T31993
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_013658_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower leg rest of mesenchyme Moderate Regionally restricted euxassay_013658_01
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_013658_01
Specimen euxassay_013658_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lower leg rest of mesenchyme Moderate Regionally restricted euxassay_013658_02
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_013658_02
Specimen euxassay_013658_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013658_03
TS23: lower leg rest of mesenchyme Moderate Regionally restricted euxassay_013658_03
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_013658_03
Specimen euxassay_013658_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013658_04
TS23: upper leg rest of mesenchyme Weak Regionally restricted euxassay_013658_04
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_013658_04
Specimen euxassay_013658_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013658_05
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013658_05
TS23: humerus Moderate Regionally restricted euxassay_013658_05
Specimen euxassay_013658_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013658_06
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013658_06
TS23: pons mantle layer Weak Regionally restricted euxassay_013658_06
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013658_06
TS23: humerus Moderate Regionally restricted euxassay_013658_06
Specimen euxassay_013658_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Weak Regionally restricted euxassay_013658_07
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013658_07
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013658_07
TS23: hindlimb digit 5 mesenchyme Moderate Regionally restricted euxassay_013658_07
TS23: hindlimb digit 4 mesenchyme Moderate Regionally restricted euxassay_013658_07
TS23: hindlimb digit 3 mesenchyme Moderate Regionally restricted euxassay_013658_07
TS23: hindlimb digit 2 mesenchyme Moderate Regionally restricted euxassay_013658_07
TS23: hindlimb digit 1 mesenchyme Moderate Regionally restricted euxassay_013658_07
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_013658_07
TS23: lower lip Weak Regionally restricted euxassay_013658_07
Specimen euxassay_013658_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_013658_08
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013658_08
TS23: pons mantle layer Weak Regionally restricted euxassay_013658_08
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013658_08
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013658_08
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_013658_08
Specimen euxassay_013658_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_013658_09
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013658_09
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013658_09
TS23: pons mantle layer Weak Regionally restricted euxassay_013658_09
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013658_09
TS23: axial skeleton cervical region Moderate Regionally restricted euxassay_013658_09
Specimen euxassay_013658_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_013658_10
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013658_10
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013658_10
TS23: pons mantle layer Weak Regionally restricted euxassay_013658_10
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013658_10
TS23: ventral grey horn Weak Regionally restricted euxassay_013658_10
TS23: femur Strong Regionally restricted euxassay_013658_10
TS23: axial skeleton cervical region Moderate Regionally restricted euxassay_013658_10
Specimen euxassay_013658_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_013658_11
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013658_11
TS23: pons mantle layer Weak Regionally restricted euxassay_013658_11
TS23: medulla oblongata alar plate mantle layer Weak Regionally restricted euxassay_013658_11
TS23: ventral grey horn Weak Regionally restricted euxassay_013658_11
TS23: dorsal grey horn Weak Regionally restricted euxassay_013658_11
TS23: axial skeleton cervical region Moderate Regionally restricted euxassay_013658_11
Specimen euxassay_013658_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013658_12
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013658_12
TS23: ventral grey horn Weak Regionally restricted euxassay_013658_12
TS23: axial skeleton cervical region Moderate Regionally restricted euxassay_013658_12
Specimen euxassay_013658_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: bladder Weak Regionally restricted euxassay_013658_13
TS23: urethra Weak Regionally restricted euxassay_013658_13 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: palatal shelf Weak Regionally restricted euxassay_013658_13
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013658_13
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013658_13
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013658_13
TS23: pons mantle layer Weak Regionally restricted euxassay_013658_13
TS23: ventral grey horn Weak Regionally restricted euxassay_013658_13
Specimen euxassay_013658_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: bladder Weak Regionally restricted euxassay_013658_14
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013658_14
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013658_14
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013658_14
TS23: pons mantle layer Weak Regionally restricted euxassay_013658_14
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013658_14
TS23: upper lip Weak Regionally restricted euxassay_013658_14
TS23: axial skeleton cervical region Moderate Regionally restricted euxassay_013658_14
Specimen euxassay_013658_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: bladder Weak Regionally restricted euxassay_013658_15
TS23: urethra Weak Regionally restricted euxassay_013658_15 Originally this result was annotated to a male-specific term, but as the specimen was not sexed, it is likely the data annotator intended to use a non-gender specific term.
TS23: palatal shelf Weak Regionally restricted euxassay_013658_15
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013658_15
TS23: pons mantle layer Weak Regionally restricted euxassay_013658_15
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013658_15
TS23: telencephalon mantle layer Weak Regionally restricted euxassay_013658_15
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013658_15
TS23: upper lip Weak Regionally restricted euxassay_013658_15
TS23: axial skeleton cervical region Moderate Regionally restricted euxassay_013658_15
Specimen euxassay_013658_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013658_16
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013658_16
TS23: pons mantle layer Weak Regionally restricted euxassay_013658_16
TS23: midbrain mantle layer Weak Regionally restricted euxassay_013658_16
TS23: ventral grey horn Moderate Regionally restricted euxassay_013658_16
TS23: dorsal grey horn Weak Regionally restricted euxassay_013658_16
TS23: upper lip Weak Regionally restricted euxassay_013658_16
TS23: lower lip Weak Regionally restricted euxassay_013658_16
TS23: axial skeleton cervical region Moderate Regionally restricted euxassay_013658_16
Specimen euxassay_013658_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: diencephalon lateral wall mantle layer Weak Regionally restricted euxassay_013658_17
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_013658_17
TS23: pons mantle layer Weak Regionally restricted euxassay_013658_17
TS23: axial skeleton cervical region Moderate Regionally restricted euxassay_013658_17
Specimen euxassay_013658_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: upper lip Weak Regionally restricted euxassay_013658_18
Specimen euxassay_013658_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: femur Strong Regionally restricted euxassay_013658_19
Specimen euxassay_013658_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: femur Moderate Regionally restricted euxassay_013658_20
TS23: hindlimb digit 5 mesenchyme Moderate Regionally restricted euxassay_013658_20
TS23: hindlimb digit 4 mesenchyme Moderate Regionally restricted euxassay_013658_20
TS23: hindlimb digit 3 mesenchyme Moderate Regionally restricted euxassay_013658_20
Specimen euxassay_013658_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_013658_21
TS23: hindlimb digit 5 mesenchyme Moderate Regionally restricted euxassay_013658_21
TS23: hindlimb digit 4 mesenchyme Moderate Regionally restricted euxassay_013658_21
TS23: hindlimb digit 3 mesenchyme Moderate Regionally restricted euxassay_013658_21
TS23: hindlimb digit 2 mesenchyme Moderate Regionally restricted euxassay_013658_21
TS23: extrinsic ocular muscle Moderate Regionally restricted euxassay_013658_21
Specimen euxassay_013658_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Weak Regionally restricted euxassay_013658_22
TS23: hindlimb digit 3 mesenchyme Moderate Regionally restricted euxassay_013658_22
TS23: hindlimb digit 2 mesenchyme Moderate Regionally restricted euxassay_013658_22
TS23: hindlimb digit 1 mesenchyme Moderate Regionally restricted euxassay_013658_22
TS23: extrinsic ocular muscle Weak Regionally restricted euxassay_013658_22
TS23: humerus Moderate Regionally restricted euxassay_013658_22
Specimen euxassay_013658_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: vibrissa Moderate Regionally restricted euxassay_013658_23
TS23: lower lip Weak Regionally restricted euxassay_013658_23
TS23: pharyngo-tympanic tube Weak Regionally restricted euxassay_013658_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory