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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4827098
Gene symbol: Pcnx1
Gene name: pecanex 1
Probe: T38919
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_010890_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_010890_03
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_010890_03
Specimen euxassay_010890_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_010890_04
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_010890_04
Specimen euxassay_010890_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_010890_05
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_010890_05
Specimen euxassay_010890_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_010890_06
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_010890_06
Specimen euxassay_010890_07: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_010890_07
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_010890_07
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_010890_07
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_010890_07 facial motor nucleus
Specimen euxassay_010890_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_010890_08
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_010890_08
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_010890_08
Specimen euxassay_010890_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_010890_09
TS23: metencephalon part of 4th ventricle choroid plexus Moderate Regionally restricted euxassay_010890_09
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_010890_09
Specimen euxassay_010890_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: lateral ventricle choroid plexus Moderate Regionally restricted euxassay_010890_10
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_010890_10
Specimen euxassay_010890_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010890_11
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_010890_11
Specimen euxassay_010890_13: embryonic day 14.5 (more )
Note: Additional information for this specimen was included in the Eurexpress data submission file.
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010890_13
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_010890_13
TS23: medulla oblongata basal plate mantle layer Weak Regionally restricted euxassay_010890_13 facial motor nucleus
Specimen euxassay_010890_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010890_14
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_010890_14
Specimen euxassay_010890_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010890_15
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_010890_15
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_010890_15
Specimen euxassay_010890_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010890_16
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_010890_16
Specimen euxassay_010890_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010890_17
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_010890_17
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_010890_17
Specimen euxassay_010890_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010890_18
TS23: lateral ventricle choroid plexus Weak Regionally restricted euxassay_010890_18
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_010890_18
Specimen euxassay_010890_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: metencephalon part of 4th ventricle choroid plexus Weak Regionally restricted euxassay_010890_19
TS23: cerebral cortex marginal layer Weak Regionally restricted euxassay_010890_19
Specimen euxassay_010890_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_010890_20
Specimen euxassay_010890_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: cerebral cortex marginal layer Moderate Regionally restricted euxassay_010890_21
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory