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Gene Expression Data
Assay Details
Assay
Reference: J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Assay type: RNA in situ
MGI Accession ID: MGI:4828422
Gene symbol: Spon1
Gene name: spondin 1, (f-spondin) extracellular matrix protein
Probe: T30933
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure.
Results
Specimen euxassay_009887_01: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_009887_01
Specimen euxassay_009887_02: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_009887_02
Specimen euxassay_009887_03: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Strong Regionally restricted euxassay_009887_03
TS23: mandible Moderate Regionally restricted euxassay_009887_03
Specimen euxassay_009887_04: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_009887_04
Specimen euxassay_009887_05: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Weak Regionally restricted euxassay_009887_05
Specimen euxassay_009887_06: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: maxilla Weak Regionally restricted euxassay_009887_06
TS23: mandible Weak Regionally restricted euxassay_009887_06
TS23: pons marginal layer Strong Single cells euxassay_009887_06
Specimen euxassay_009887_07: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Strong Single cells euxassay_009887_07
Specimen euxassay_009887_08: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: maxilla Moderate Regionally restricted euxassay_009887_08
TS23: mandible Moderate Regionally restricted euxassay_009887_08
TS23: pons mantle layer Strong Single cells euxassay_009887_08
TS23: medulla oblongata basal plate mantle layer Strong Single cells euxassay_009887_08
Specimen euxassay_009887_09: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: maxilla Strong Regionally restricted euxassay_009887_09
TS23: mandible Strong Regionally restricted euxassay_009887_09
TS23: pons mantle layer Strong Single cells euxassay_009887_09
TS23: pons ventricular layer Strong Single cells euxassay_009887_09
TS23: medulla oblongata basal plate mantle layer Strong Single cells euxassay_009887_09
TS23: midbrain ventricular layer Weak Regionally restricted euxassay_009887_09
Specimen euxassay_009887_10: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: maxilla Strong Regionally restricted euxassay_009887_10
TS23: mandible Strong Regionally restricted euxassay_009887_10
TS23: medulla oblongata basal plate mantle layer Strong Single cells euxassay_009887_10
TS23: pons mantle layer Strong Single cells euxassay_009887_10
TS23: pons ventricular layer Strong Single cells euxassay_009887_10
TS23: ventral grey horn Strong Single cells euxassay_009887_10
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_009887_10
Specimen euxassay_009887_11: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_009887_11
TS23: pons ventricular layer Strong Single cells euxassay_009887_11
TS23: medulla oblongata basal plate ventricular layer Strong Single cells euxassay_009887_11
TS23: medulla oblongata basal plate mantle layer Strong Single cells euxassay_009887_11
TS23: pons mantle layer Strong Single cells euxassay_009887_11
TS23: ventral grey horn Strong Single cells euxassay_009887_11
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_009887_11
TS23: hypothalamus ventricular layer Strong Regionally restricted euxassay_009887_11
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_009887_11
TS23: aorta Moderate Regionally restricted euxassay_009887_11
Specimen euxassay_009887_12: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pons mantle layer Strong Single cells euxassay_009887_12
TS23: medulla oblongata basal plate ventricular layer Strong Single cells euxassay_009887_12
TS23: pons ventricular layer Strong Single cells euxassay_009887_12
TS23: medulla oblongata basal plate mantle layer Strong Single cells euxassay_009887_12
TS23: ventral grey horn Strong Single cells euxassay_009887_12
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_009887_12
TS23: hypothalamus ventricular layer Strong Regionally restricted euxassay_009887_12
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_009887_12
TS23: aorta Moderate Regionally restricted euxassay_009887_12
Specimen euxassay_009887_13: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Strong Single cells euxassay_009887_13
TS23: medulla oblongata basal plate ventricular layer Strong Single cells euxassay_009887_13
TS23: pons mantle layer Strong Single cells euxassay_009887_13
TS23: pons ventricular layer Strong Single cells euxassay_009887_13
TS23: ventral grey horn Strong Single cells euxassay_009887_13
TS23: diencephalon lateral wall ventricular layer Strong Regionally restricted euxassay_009887_13
TS23: hypothalamus ventricular layer Strong Regionally restricted euxassay_009887_13
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_009887_13
TS23: aorta Moderate Regionally restricted euxassay_009887_13
Specimen euxassay_009887_14: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: medulla oblongata basal plate mantle layer Strong Single cells euxassay_009887_14
TS23: medulla oblongata basal plate ventricular layer Strong Single cells euxassay_009887_14
TS23: pons mantle layer Strong Single cells euxassay_009887_14
TS23: pons ventricular layer Strong Single cells euxassay_009887_14
TS23: ventral grey horn Strong Single cells euxassay_009887_14
TS23: midbrain ventricular layer Strong Regionally restricted euxassay_009887_14
TS23: aorta Moderate Regionally restricted euxassay_009887_14
Specimen euxassay_009887_15: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_009887_15
TS23: pons ventricular layer Moderate Single cells euxassay_009887_15
TS23: pons mantle layer Moderate Single cells euxassay_009887_15
TS23: medulla oblongata basal plate mantle layer Moderate Single cells euxassay_009887_15
TS23: ventral grey horn Strong Single cells euxassay_009887_15
TS23: midbrain ventricular layer Moderate Regionally restricted euxassay_009887_15
TS23: aorta Moderate Regionally restricted euxassay_009887_15
Specimen euxassay_009887_16: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: maxilla Moderate Regionally restricted euxassay_009887_16
TS23: mandible Moderate Regionally restricted euxassay_009887_16
TS23: pons mantle layer Moderate Single cells euxassay_009887_16
TS23: pons ventricular layer Moderate Single cells euxassay_009887_16
TS23: medulla oblongata basal plate ventricular layer Moderate Single cells euxassay_009887_16
TS23: ventral grey horn Strong Single cells euxassay_009887_16
Specimen euxassay_009887_17: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: maxilla Moderate Regionally restricted euxassay_009887_17
TS23: mandible Moderate Regionally restricted euxassay_009887_17
TS23: medulla oblongata basal plate mantle layer Moderate Single cells euxassay_009887_17
TS23: pons mantle layer Moderate Single cells euxassay_009887_17
TS23: ventral grey horn Moderate Single cells euxassay_009887_17
Specimen euxassay_009887_18: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Weak Regionally restricted euxassay_009887_18
TS23: maxilla Weak Regionally restricted euxassay_009887_18
TS23: pons mantle layer Moderate Single cells euxassay_009887_18
Specimen euxassay_009887_19: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Weak Regionally restricted euxassay_009887_19
TS23: pons mantle layer Strong Regionally restricted euxassay_009887_19
Specimen euxassay_009887_20: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_009887_20
TS23: maxilla Moderate Regionally restricted euxassay_009887_20
Specimen euxassay_009887_21: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_009887_21
Specimen euxassay_009887_22: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: mandible Moderate Regionally restricted euxassay_009887_22
Specimen euxassay_009887_23: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS23: pharyngo-tympanic tube Moderate Regionally restricted euxassay_009887_23
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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Send questions and comments to User Support. 		last database update
06/12/2024
MGI 6.13 		The Jackson Laboratory