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Gene Expression Data
Assay Details
Assay
Reference: J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
Assay type: RNA in situ
MGI Accession ID: MGI:4944840
Gene symbol: Snx5
Gene name: sorting nexin 5
Probe: g00269
Probe preparation: Antisense labelled with P33 RNA
Visualized with: Autoradiography
Results
Specimen g00269 E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: diencephalon Present Widespread g00269_sj_g41_063_e11 , g00269_sj_g41_013_e11
TS19: midbrain Present Widespread g00269_sj_g41_013_e11 , g00269_sj_g41_063_e11
TS19: hindbrain Present Regionally restricted g00269_sj_g41_013_e11 , g00269_sj_g41_063_e11 Expression was region specific and scattered.
TS19: future spinal cord Present Widespread g00269_sj_g41_063_e11 , g00269_sj_g41_013_e11
TS19: telencephalon Present Widespread g00269_sj_g41_063_e11 , g00269_sj_g41_013_e11
Specimen g00269 E15.5: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cerebellum Present Widespread g00269_sj_g45_106_e15 , g00269_sj_g45_056_e15 , g00269_sj_g45_006_e15
TS23: hindbrain Present Widespread g00269_sj_g45_106_e15 , g00269_sj_g45_056_e15 , g00269_sj_g45_006_e15
TS23: hypothalamus Present Widespread g00269_sj_g45_056_e15 , g00269_sj_g45_106_e15 , g00269_sj_g45_006_e15
TS23: midbrain Present Widespread g00269_sj_g45_106_e15 , g00269_sj_g45_006_e15 , g00269_sj_g45_056_e15
TS23: main olfactory bulb Present Widespread g00269_sj_g45_006_e15 , g00269_sj_g45_056_e15 , g00269_sj_g45_106_e15
TS23: spinal cord Present Regionally restricted g00269_sj_g45_006_e15 , g00269_sj_g45_056_e15 , g00269_sj_g45_106_e15 Expression was region specific and scattered.
TS23: ganglionic eminence Strong Regionally restricted g00269_sj_g45_006_e15 , g00269_sj_g45_056_e15 , g00269_sj_g45_106_e15 Expression was region specific and scattered.
TS23: hippocampus Strong Regionally restricted g00269_sj_g45_006_e15 , g00269_sj_g45_056_e15 , g00269_sj_g45_106_e15 Expression was region specific and scattered.
TS23: neocortex Strong Regionally restricted g00269_sj_g45_106_e15 , g00269_sj_g45_006_e15 , g00269_sj_g45_056_e15 Expression was region specific and scattered.
Specimen g00269 P7: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g00269_sj_g40_149_p7 , g00269_sj_g40_099_p7 , g00269_sj_g40_049_p7
TS28: basal ganglia Present Widespread g00269_sj_g40_099_p7 , g00269_sj_g40_049_p7 , g00269_sj_g40_149_p7
TS28: brainstem Present Widespread g00269_sj_g40_149_p7 , g00269_sj_g40_049_p7 , g00269_sj_g40_099_p7
TS28: cerebellum Present Regionally restricted g00269_sj_g40_049_p7 , g00269_sj_g40_099_p7 , g00269_sj_g40_149_p7 Expression was region specific and scattered.
TS28: cerebral cortex Present Widespread g00269_sj_g40_149_p7 , g00269_sj_g40_049_p7 , g00269_sj_g40_099_p7
TS28: choroid plexus Present Regionally restricted g00269_sj_g40_099_p7 , g00269_sj_g40_149_p7 , g00269_sj_g40_049_p7
TS28: hippocampus Present Widespread g00269_sj_g40_049_p7 , g00269_sj_g40_149_p7 , g00269_sj_g40_099_p7
TS28: hypothalamus Present Widespread g00269_sj_g40_099_p7 , g00269_sj_g40_149_p7 , g00269_sj_g40_049_p7
TS28: meninges Present Regionally restricted g00269_sj_g40_149_p7 , g00269_sj_g40_049_p7 , g00269_sj_g40_099_p7
TS28: midbrain Present Widespread g00269_sj_g40_049_p7 , g00269_sj_g40_099_p7 , g00269_sj_g40_149_p7
TS28: main olfactory bulb Present Widespread g00269_sj_g40_099_p7 , g00269_sj_g40_049_p7 , g00269_sj_g40_149_p7
TS28: spinal cord Present Widespread g00269_sj_g40_049_p7 , g00269_sj_g40_099_p7 , g00269_sj_g40_149_p7
TS28: thalamus Present Widespread g00269_sj_g40_049_p7 , g00269_sj_g40_099_p7 , g00269_sj_g40_149_p7
TS28: retina Absent g00269_sj_g40_099_p7 , g00269_sj_g40_149_p7 , g00269_sj_g40_049_p7
Specimen g00269 Adult: postnatal day 42 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g00269_sj_g57_108_ads , g00269_sj_g5_025_adc , g00269_sj_g57_008_ads , g00269_sj_g5_075_adc , g00269_sj_g57_058_ads
TS28: basal ganglia Present Widespread g00269_sj_g57_108_ads , g00269_sj_g57_008_ads , g00269_sj_g5_075_adc , g00269_sj_g5_025_adc , g00269_sj_g57_058_ads
TS28: brainstem Present Widespread g00269_sj_g57_008_ads , g00269_sj_g57_058_ads , g00269_sj_g5_075_adc , g00269_sj_g5_025_adc , g00269_sj_g57_108_ads
TS28: cerebellum Present Regionally restricted g00269_sj_g5_075_adc , g00269_sj_g57_108_ads , g00269_sj_g5_025_adc , g00269_sj_g57_008_ads , g00269_sj_g57_058_ads Expression was region specific and scattered.
TS28: cerebral cortex Present Widespread g00269_sj_g57_058_ads , g00269_sj_g57_108_ads , g00269_sj_g5_025_adc , g00269_sj_g5_075_adc , g00269_sj_g57_008_ads
TS28: hippocampus Present Widespread g00269_sj_g5_075_adc , g00269_sj_g57_008_ads , g00269_sj_g5_025_adc , g00269_sj_g57_058_ads , g00269_sj_g57_108_ads
TS28: hypothalamus Present Widespread g00269_sj_g57_008_ads , g00269_sj_g57_108_ads , g00269_sj_g5_025_adc , g00269_sj_g57_058_ads , g00269_sj_g5_075_adc
TS28: midbrain Present Widespread g00269_sj_g5_025_adc , g00269_sj_g5_075_adc , g00269_sj_g57_108_ads , g00269_sj_g57_008_ads , g00269_sj_g57_058_ads
TS28: main olfactory bulb Present Widespread g00269_sj_g5_025_adc , g00269_sj_g57_058_ads , g00269_sj_g57_108_ads , g00269_sj_g57_008_ads , g00269_sj_g5_075_adc
TS28: spinal cord Present Widespread g00269_sj_g57_108_ads , g00269_sj_g57_058_ads , g00269_sj_g5_075_adc , g00269_sj_g57_008_ads , g00269_sj_g5_025_adc
TS28: thalamus Present Widespread g00269_sj_g5_075_adc , g00269_sj_g57_008_ads , g00269_sj_g57_058_ads , g00269_sj_g57_108_ads , g00269_sj_g5_025_adc
TS28: retina Strong Regionally restricted g00269_sj_g57_008_ads , g00269_sj_g57_108_ads , g00269_sj_g57_058_ads , g00269_sj_g5_025_adc , g00269_sj_g5_075_adc
TS28: choroid plexus Absent g00269_sj_g57_108_ads , g00269_sj_g57_058_ads , g00269_sj_g57_008_ads , g00269_sj_g5_025_adc , g00269_sj_g5_075_adc
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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09/17/2024
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