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Gene Expression Data
Assay Details
Assay
Reference: J:162220 Magdaleno S, et al., BGEM: an in situ hybridization database of gene expression in the embryonic and adult mouse nervous system. PLoS Biol. 2006 Apr;4(4):e86
Assay type: RNA in situ
MGI Accession ID: MGI:4945570
Gene symbol: H2-Aa
Gene name: histocompatibility 2, class II antigen A, alpha
Probe: g01102
Probe preparation: Antisense labelled with P33 RNA
Visualized with: Autoradiography
Results
Specimen g01102 E11.5: embryonic day 11.5 (more )
Structure Level Pattern Image Note
TS19: diencephalon Present Widespread g01102_sj_g49_039_e11 , g01102_sj_g49_089_e11
TS19: midbrain Present Widespread g01102_sj_g49_039_e11 , g01102_sj_g49_089_e11
TS19: telencephalon Present Widespread g01102_sj_g49_089_e11 , g01102_sj_g49_039_e11
TS19: hindbrain Strong Regionally restricted g01102_sj_g49_039_e11 , g01102_sj_g49_089_e11 Expression was region specific and scattered.
TS19: future spinal cord Strong Regionally restricted g01102_sj_g49_039_e11 , g01102_sj_g49_089_e11 Expression was region specific and scattered.
Specimen g01102 E15.5: embryonic day 15.5 (more )
Structure Level Pattern Image Note
TS23: cerebellum Present Widespread g01102_sj_g49_089_e15 , g01102_sj_g49_139_e15 , g01102_sj_g49_039_e15
TS23: ganglionic eminence Present Widespread g01102_sj_g49_089_e15 , g01102_sj_g49_139_e15 , g01102_sj_g49_039_e15
TS23: hypothalamus Present Widespread g01102_sj_g49_139_e15 , g01102_sj_g49_039_e15 , g01102_sj_g49_089_e15
TS23: midbrain Present Widespread g01102_sj_g49_089_e15 , g01102_sj_g49_039_e15 , g01102_sj_g49_139_e15
TS23: main olfactory bulb Present Widespread g01102_sj_g49_139_e15 , g01102_sj_g49_039_e15 , g01102_sj_g49_089_e15
TS23: hindbrain Strong Regionally restricted g01102_sj_g49_089_e15 , g01102_sj_g49_039_e15 , g01102_sj_g49_139_e15 Expression was region specific and scattered.
TS23: hippocampus Strong Regionally restricted g01102_sj_g49_039_e15 , g01102_sj_g49_089_e15 , g01102_sj_g49_139_e15 Expression was region specific and scattered.
TS23: neocortex Strong Regionally restricted g01102_sj_g49_089_e15 , g01102_sj_g49_139_e15 , g01102_sj_g49_039_e15 Expression was region specific and scattered.
TS23: spinal cord Strong Regionally restricted g01102_sj_g49_039_e15 , g01102_sj_g49_139_e15 , g01102_sj_g49_089_e15 Expression was region specific and scattered.
Specimen g01102 P7: postnatal day 7 (more )
Structure Level Pattern Image Note
TS28: basal ganglia Present Widespread g01102_sj_g49_139_p7 , g01102_sj_g49_089_p7 , g01102_sj_g49_039_p7
TS28: brainstem Present Widespread g01102_sj_g49_089_p7 , g01102_sj_g49_039_p7 , g01102_sj_g49_139_p7
TS28: cerebellum Present Regionally restricted g01102_sj_g49_039_p7 , g01102_sj_g49_139_p7 , g01102_sj_g49_089_p7 Expression was region specific and scattered.
TS28: choroid plexus Present Regionally restricted g01102_sj_g49_039_p7 , g01102_sj_g49_089_p7 , g01102_sj_g49_139_p7
TS28: hypothalamus Present Widespread g01102_sj_g49_139_p7 , g01102_sj_g49_089_p7 , g01102_sj_g49_039_p7
TS28: meninges Present Regionally restricted g01102_sj_g49_039_p7 , g01102_sj_g49_139_p7 , g01102_sj_g49_089_p7
TS28: midbrain Present Widespread g01102_sj_g49_089_p7 , g01102_sj_g49_139_p7 , g01102_sj_g49_039_p7
TS28: main olfactory bulb Present Regionally restricted g01102_sj_g49_139_p7 , g01102_sj_g49_039_p7 , g01102_sj_g49_089_p7 Expression was region specific and scattered.
TS28: spinal cord Present Widespread g01102_sj_g49_139_p7 , g01102_sj_g49_089_p7 , g01102_sj_g49_039_p7
TS28: thalamus Present Widespread g01102_sj_g49_139_p7 , g01102_sj_g49_089_p7 , g01102_sj_g49_039_p7
TS28: amygdala Strong Regionally restricted g01102_sj_g49_139_p7 , g01102_sj_g49_039_p7 , g01102_sj_g49_089_p7 Expression was region specific and scattered.
TS28: cerebral cortex Strong Regionally restricted g01102_sj_g49_089_p7 , g01102_sj_g49_039_p7 , g01102_sj_g49_139_p7 Expression was region specific and scattered.
TS28: hippocampus Strong Regionally restricted g01102_sj_g49_039_p7 , g01102_sj_g49_139_p7 , g01102_sj_g49_089_p7 Expression was region specific and scattered.
TS28: retina Strong Regionally restricted g01102_sj_g49_139_p7 , g01102_sj_g49_039_p7 , g01102_sj_g49_089_p7
Specimen g01102 Adult: postnatal day 42 (more )
Structure Level Pattern Image Note
TS28: amygdala Present Widespread g01102_sj_g49_039_ads , g01102_sj_g49_089_ads , g01102_sj_g49_139_ads , g01102_sj_g49_089_adc , g01102_sj_g49_039_adc
TS28: basal ganglia Present Widespread g01102_sj_g49_089_adc , g01102_sj_g49_139_ads , g01102_sj_g49_089_ads , g01102_sj_g49_039_ads , g01102_sj_g49_039_adc
TS28: brainstem Present Widespread g01102_sj_g49_039_ads , g01102_sj_g49_089_ads , g01102_sj_g49_089_adc , g01102_sj_g49_039_adc , g01102_sj_g49_139_ads
TS28: choroid plexus Present Regionally restricted g01102_sj_g49_089_adc , g01102_sj_g49_039_ads , g01102_sj_g49_139_ads , g01102_sj_g49_089_ads , g01102_sj_g49_039_adc
TS28: hypothalamus Present Widespread g01102_sj_g49_139_ads , g01102_sj_g49_089_adc , g01102_sj_g49_039_adc , g01102_sj_g49_089_ads , g01102_sj_g49_039_ads
TS28: meninges Present Regionally restricted g01102_sj_g49_139_ads , g01102_sj_g49_039_adc , g01102_sj_g49_089_adc , g01102_sj_g49_089_ads , g01102_sj_g49_039_ads
TS28: midbrain Present Widespread g01102_sj_g49_089_ads , g01102_sj_g49_139_ads , g01102_sj_g49_039_adc , g01102_sj_g49_039_ads , g01102_sj_g49_089_adc
TS28: retina Present Regionally restricted g01102_sj_g49_039_ads , g01102_sj_g49_089_adc , g01102_sj_g49_089_ads , g01102_sj_g49_139_ads , g01102_sj_g49_039_adc
TS28: spinal cord Present Regionally restricted g01102_sj_g49_089_ads , g01102_sj_g49_089_adc , g01102_sj_g49_139_ads , g01102_sj_g49_039_ads , g01102_sj_g49_039_adc Expression was region specific and scattered.
TS28: thalamus Present Widespread g01102_sj_g49_089_adc , g01102_sj_g49_039_adc , g01102_sj_g49_039_ads , g01102_sj_g49_139_ads , g01102_sj_g49_089_ads
TS28: cerebellum Strong Regionally restricted g01102_sj_g49_039_ads , g01102_sj_g49_139_ads , g01102_sj_g49_089_adc , g01102_sj_g49_039_adc , g01102_sj_g49_089_ads Expression was region specific and scattered.
TS28: cerebral cortex Strong Regionally restricted g01102_sj_g49_089_adc , g01102_sj_g49_139_ads , g01102_sj_g49_039_adc , g01102_sj_g49_089_ads , g01102_sj_g49_039_ads Expression was region specific and scattered.
TS28: hippocampus Strong Regionally restricted g01102_sj_g49_039_ads , g01102_sj_g49_139_ads , g01102_sj_g49_089_adc , g01102_sj_g49_039_adc , g01102_sj_g49_089_ads Expression was region specific and scattered.
TS28: main olfactory bulb Strong Regionally restricted g01102_sj_g49_089_adc , g01102_sj_g49_039_ads , g01102_sj_g49_139_ads , g01102_sj_g49_089_ads , g01102_sj_g49_039_adc Expression was region specific and scattered.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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09/17/2024
MGI 6.24 		The Jackson Laboratory