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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5420994
Gene symbol: Lhx3
Gene name: LIM homeobox protein 3
Probe: MH375 probe 251
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen MH375; Specimen C1114: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_C1114_8_3A
TS22: central nervous system Strong Regionally restricted Embryo_C1114_8_3A
TS22: telencephalon Moderate Regionally restricted Embryo_C1114_8_4A
TS22: cerebral cortex Moderate Regionally restricted Embryo_C1114_8_4A
TS22: neocortex Moderate Regionally restricted Embryo_C1114_8_4A
TS22: olfactory cortex Moderate Regionally restricted Embryo_C1114_8_4A
TS22: main olfactory bulb Moderate Regionally restricted Embryo_C1114_8_4A
TS22: piriform cortex Weak Regionally restricted Embryo_C1114_8_5A
TS22: hippocampus Moderate Regionally restricted Embryo_C1114_8_2A
TS22: basal ganglia Moderate Regionally restricted Embryo_C1114_8_2A
TS22: corpus striatum Moderate Regionally restricted Embryo_C1114_8_2A Expression was detected in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Weak Regionally restricted Embryo_C1114_8_4A
TS22: amygdala Weak Regionally restricted Embryo_C1114_8_1A
TS22: telencephalon septum Weak Regionally restricted Embryo_C1114_8_3C
TS22: pallidum Weak Regionally restricted Embryo_C1114_8_4B Expression was weak in the pallidum (medial ganglionic eminence).
TS22: diencephalon Weak Regionally restricted Embryo_C1114_8_3B
TS22: thalamus Weak Regionally restricted Embryo_C1114_8_3B
TS22: hypothalamus Weak Regionally restricted Embryo_C1114_8_3B
TS22: midbrain Moderate Regionally restricted Embryo_C1114_8_3A
TS22: pretectum Weak Regionally restricted Embryo_C1114_8_3A
TS22: superior colliculus Moderate Regionally restricted Embryo_C1114_8_3B
TS22: inferior colliculus Moderate Regionally restricted Embryo_C1114_8_3C
TS22: midbrain tegmentum Moderate Regionally restricted Embryo_C1114_8_3A
TS22: hindbrain Strong Regionally restricted Embryo_C1114_8_3A
TS22: cerebellum Moderate Regionally restricted Embryo_C1114_8_3A
TS22: pons Strong Regionally restricted Embryo_C1114_8_4B
TS22: medulla oblongata Strong Regionally restricted Embryo_C1114_8_3A
TS22: spinal cord Strong Regionally restricted Embryo_C1114_8_2D
TS22: choroid plexus Weak Regionally restricted Embryo_C1114_8_3B
TS22: meninges Weak Ubiquitous Embryo_C1114_8_3B
TS22: peripheral nervous system Weak Regionally restricted Embryo_C1114_8_5A
TS22: cranial ganglion Weak Regionally restricted Embryo_C1114_8_5A
TS22: dorsal root ganglion Weak Regionally restricted Embryo_C1114_8_2B
TS22: eye Absent
TS22: retina Absent
TS22: optic nerve Absent
TS22: nose Absent
TS22: olfactory epithelium Absent
TS22: ear Moderate Regionally restricted Embryo_C1114_8_1B
TS22: inner ear Moderate Regionally restricted Embryo_C1114_8_1B
TS22: cochlea Weak Regionally restricted Embryo_C1114_8_4A
TS22: inner ear labyrinth Moderate Regionally restricted Embryo_C1114_8_1B
TS22: alimentary system Strong Regionally restricted Embryo_C1114_8_3A Expression was strong in the digestive system.
TS22: intestine Absent
TS22: salivary gland Absent
TS22: tongue Strong Regionally restricted Embryo_C1114_8_3A
TS22: tooth Absent
TS22: palatal shelf Weak Regionally restricted Embryo_C1114_8_2D
TS22: esophagus Absent
TS22: stomach Moderate Regionally restricted Embryo_C1114_8_5A
TS22: liver Absent
TS22: respiratory system Weak Regionally restricted Embryo_C1114_8_3A
TS22: pharynx Weak Regionally restricted Embryo_C1114_8_3A
TS22: larynx Absent
TS22: trachea Weak Regionally restricted Embryo_C1114_8_3A
TS22: main bronchus Absent
TS22: lung Absent
TS22: urinary system Strong Regionally restricted Embryo_C1114_8_3A Expression was strong in the genito-urinary system.
TS22: metanephros Absent
TS22: ureter Absent
TS22: bladder Absent
TS22: urethra Absent
TS22: reproductive system Strong Regionally restricted Embryo_C1114_8_3A
TS22: genital tubercle Strong Regionally restricted Embryo_C1114_8_3A
TS22: gonad Absent
TS22: gland Strong Regionally restricted Embryo_C1114_8_3C Expression was strong in the endocrine system.
TS22: thyroid gland Absent
TS22: pituitary gland Strong Regionally restricted Embryo_C1114_8_3C
TS22: pancreas Absent
TS22: adrenal gland Absent
TS22: cardiovascular system Weak Regionally restricted Embryo_C1114_8_2C
TS22: heart Weak Regionally restricted Embryo_C1114_8_2D
TS22: heart atrium Weak Regionally restricted Embryo_C1114_8_2D
TS22: heart ventricle Weak Regionally restricted Embryo_C1114_8_3A
TS22: blood vessel Weak Regionally restricted Embryo_C1114_8_2C
TS22: hemolymphoid system Weak Regionally restricted Embryo_C1114_8_5B Expression was weak in the immune system.
TS22: spleen primordium Weak Regionally restricted Embryo_C1114_8_5B
TS22: thymus primordium Absent
TS22: appendicular skeleton Weak Regionally restricted Embryo_C1114_8_1A Expression was weak in the skeleton (limbs, shoulder, hip).
TS22: musculature Weak Regionally restricted Embryo_C1114_8_5A
TS22: face Moderate Regionally restricted Embryo_C1114_8_3A Expression was detected in the face/soft tissues.
TS22: facial bone primordium Weak Regionally restricted Embryo_C1114_8_4A
TS22: cranium Absent Expression was not detected in the skull (base and vault).
TS22: axial skeleton Strong Regionally restricted Embryo_C1114_8_5A
TS22: tail Moderate Regionally restricted Embryo_C1114_8_2A
TS22: forelimb Moderate Regionally restricted Embryo_C1114_8_1A
TS22: hindlimb Moderate Regionally restricted Embryo_C1114_8_5A
TS22: integumental system Strong Regionally restricted Embryo_C1114_8_3A
TS22: skin Strong Regionally restricted Embryo_C1114_8_3A
TS22: hair Absent
TS22: vibrissa follicle Absent Expression was not detected in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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06/12/2024
MGI 6.13 		The Jackson Laboratory