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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5421557
Gene symbol: Gcat
Gene name: glycine C-acetyltransferase (2-amino-3-ketobutyrate-coenzyme A ligase)
Probe: MH1501 probe 1164
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen MH1501; Specimen C1512: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_C1512_5_3D
TS22: central nervous system Strong Regionally restricted Embryo_C1512_5_3D
TS22: telencephalon Moderate Regionally restricted Embryo_C1512_5_3A
TS22: cerebral cortex Moderate Regionally restricted Embryo_C1512_5_3A
TS22: neocortex Moderate Regionally restricted Embryo_C1512_5_4C
TS22: olfactory cortex Moderate Regionally restricted Embryo_C1512_5_3A
TS22: main olfactory bulb Moderate Regionally restricted Embryo_C1512_5_3A
TS22: piriform cortex Weak Regionally restricted Embryo_C1512_5_2A
TS22: hippocampus Moderate Regionally restricted Embryo_C1512_5_4D
TS22: basal ganglia Moderate Regionally restricted Embryo_C1512_5_3A
TS22: corpus striatum Moderate Regionally restricted Embryo_C1512_5_5D Expression was detected in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Weak Regionally restricted Embryo_C1512_5_5A
TS22: amygdala Absent
TS22: telencephalon septum Moderate Regionally restricted Embryo_C1512_5_4A
TS22: pallidum Moderate Regionally restricted Embryo_C1512_5_3A Expression was detected in the pallidum (medial ganglionic eminence).
TS22: diencephalon Moderate Regionally restricted Embryo_C1512_5_3D
TS22: thalamus Moderate Regionally restricted Embryo_C1512_5_3D
TS22: hypothalamus Moderate Regionally restricted Embryo_C1512_5_3D
TS22: midbrain Strong Regionally restricted Embryo_C1512_5_3D
TS22: pretectum Moderate Regionally restricted Embryo_C1512_5_3D
TS22: superior colliculus Moderate Regionally restricted Embryo_C1512_5_3D
TS22: inferior colliculus Strong Regionally restricted Embryo_C1512_5_3D
TS22: midbrain tegmentum Moderate Regionally restricted Embryo_C1512_5_3D
TS22: hindbrain Moderate Regionally restricted Embryo_C1512_5_5D
TS22: cerebellum Moderate Regionally restricted Embryo_C1512_5_5D
TS22: pons Weak Regionally restricted Embryo_C1512_5_3D
TS22: medulla oblongata Moderate Regionally restricted Embryo_C1512_5_3C
TS22: spinal cord Moderate Regionally restricted Embryo_C1512_5_3D
TS22: choroid plexus Moderate Regionally restricted Embryo_C1512_5_3D
TS22: meninges Weak Ubiquitous Embryo_C1512_5_5D
TS22: peripheral nervous system Weak Regionally restricted Embryo_C1512_5_2D
TS22: cranial ganglion Weak Regionally restricted Embryo_C1512_5_5A
TS22: dorsal root ganglion Weak Regionally restricted Embryo_C1512_5_2D
TS22: eye Moderate Regionally restricted Embryo_C1512_5_1A
TS22: retina Moderate Regionally restricted Embryo_C1512_5_1A
TS22: lens Weak Regionally restricted Embryo_C1512_5_1A
TS22: optic nerve Moderate Regionally restricted Embryo_C1512_5_2C
TS22: nose Moderate Regionally restricted Embryo_C1512_5_5A
TS22: olfactory epithelium Moderate Regionally restricted Embryo_C1512_5_5A
TS22: ear Moderate Regionally restricted Embryo_C1512_5_5A
TS22: inner ear Moderate Regionally restricted Embryo_C1512_5_5A
TS22: cochlea Moderate Regionally restricted Embryo_C1512_5_5A
TS22: inner ear labyrinth Moderate Regionally restricted Embryo_C1512_5_1C
TS22: middle ear Moderate Regionally restricted Embryo_C1512_5_1A
TS22: alimentary system Strong Regionally restricted Embryo_C1512_5_2C Expression was strong in the digestive system.
TS22: intestine Moderate Regionally restricted Embryo_C1512_5_4A
TS22: salivary gland Strong Regionally restricted Embryo_C1512_5_2C
TS22: tongue Moderate Regionally restricted Embryo_C1512_5_4A
TS22: tooth Moderate Regionally restricted Embryo_C1512_5_4C
TS22: palatal shelf Moderate Regionally restricted Embryo_C1512_5_3C
TS22: esophagus Weak Regionally restricted Embryo_C1512_5_4A
TS22: stomach Moderate Regionally restricted Embryo_C1512_5_5D
TS22: liver Moderate Regionally restricted Embryo_C1512_5_3A
TS22: respiratory system Strong Regionally restricted Embryo_C1512_5_3A
TS22: pharynx Moderate Regionally restricted Embryo_C1512_5_3D
TS22: larynx Moderate Regionally restricted Embryo_C1512_5_3D
TS22: trachea Moderate Regionally restricted Embryo_C1512_5_3D
TS22: main bronchus Moderate Regionally restricted Embryo_C1512_5_4B
TS22: lung Strong Regionally restricted Embryo_C1512_5_3A
TS22: urinary system Moderate Regionally restricted Embryo_C1512_5_4A Expression was detected in the genito-urinary system.
TS22: metanephros Moderate Regionally restricted Embryo_C1512_5_5A
TS22: ureter Weak Regionally restricted Embryo_C1512_5_3D
TS22: bladder Weak Regionally restricted Embryo_C1512_5_4A
TS22: urethra Weak Regionally restricted Embryo_C1512_5_4A
TS22: reproductive system Moderate Regionally restricted Embryo_C1512_5_4A
TS22: genital tubercle Moderate Regionally restricted Embryo_C1512_5_4A
TS22: gonad Moderate Regionally restricted Embryo_C1512_5_5D
TS22: gland Moderate Regionally restricted Embryo_C1512_5_4B Expression was detected in the endocrine system.
TS22: thyroid gland Moderate Regionally restricted Embryo_C1512_5_4B
TS22: pituitary gland Moderate Regionally restricted Embryo_C1512_5_4A
TS22: pancreas Moderate Regionally restricted Embryo_C1512_5_5A
TS22: adrenal gland Weak Regionally restricted Embryo_C1512_5_5C
TS22: cardiovascular system Moderate Regionally restricted Embryo_C1512_5_3C
TS22: heart Moderate Regionally restricted Embryo_C1512_5_3C
TS22: heart atrium Moderate Regionally restricted Embryo_C1512_5_3C
TS22: heart ventricle Weak Regionally restricted Embryo_C1512_5_4C
TS22: blood vessel Moderate Regionally restricted Embryo_C1512_5_4C
TS22: hemolymphoid system Moderate Regionally restricted Embryo_C1512_5_3C Expression was detected in the immune system.
TS22: spleen primordium Absent
TS22: thymus primordium Moderate Regionally restricted Embryo_C1512_5_3C
TS22: appendicular skeleton Moderate Regionally restricted Embryo_C1512_5_5A Expression was detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Moderate Ubiquitous Embryo_C1512_5_1C
TS22: face Moderate Regionally restricted Embryo_C1512_5_5A Expression was detected in the face/soft tissues.
TS22: facial bone primordium Absent
TS22: cranium Absent Expression was not detected in the skull (base and vault).
TS22: axial skeleton Weak Regionally restricted Embryo_C1512_5_3D
TS22: tail Strong Regionally restricted Embryo_C1512_5_4B
TS22: forelimb Strong Regionally restricted Embryo_C1512_5_1A
TS22: hindlimb Strong Regionally restricted Embryo_C1512_5_1D
TS22: integumental system Strong Regionally restricted Embryo_C1512_5_5D
TS22: skin Strong Regionally restricted Embryo_C1512_5_5D
TS22: hair Strong Regionally restricted Embryo_C1512_5_5D
TS22: vibrissa follicle Strong Regionally restricted Embryo_C1512_5_5D Expression was strong in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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12/10/2024
MGI 6.24 		The Jackson Laboratory