About   Help   FAQ
Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5421758
Gene symbol: Cdh1
Gene name: cadherin 1
Probe: DA93 probe 19
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen DA93; Specimen C1444: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_C1444_1_1C
TS22: central nervous system Weak Regionally restricted Embryo_C1444_1_4D
TS22: telencephalon Absent
TS22: cerebral cortex Absent
TS22: neocortex Absent
TS22: olfactory cortex Absent
TS22: main olfactory bulb Absent
TS22: piriform cortex Absent
TS22: hippocampus Absent
TS22: basal ganglia Absent
TS22: corpus striatum Absent Expression was not detected in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Absent
TS22: amygdala Absent
TS22: telencephalon septum Absent
TS22: pallidum Absent Expression was not detected in the pallidum (medial ganglionic eminence).
TS22: diencephalon Absent
TS22: thalamus Absent
TS22: hypothalamus Absent
TS22: midbrain Weak Regionally restricted Embryo_C1444_1_4D
TS22: pretectum Weak Regionally restricted Embryo_C1444_1_4D
TS22: superior colliculus Absent
TS22: inferior colliculus Absent
TS22: midbrain tegmentum Weak Regionally restricted Embryo_C1444_1_4D
TS22: hindbrain Absent
TS22: cerebellum Absent
TS22: pons Absent
TS22: medulla oblongata Absent
TS22: spinal cord Absent
TS22: choroid plexus Absent
TS22: meninges Strong Regionally restricted Embryo_C1444_1_2A
TS22: peripheral nervous system Weak Regionally restricted Embryo_C1444_1_3A
TS22: cranial ganglion Weak Regionally restricted Embryo_C1444_1_3A
TS22: dorsal root ganglion Weak Regionally restricted Embryo_C1444_1_3A
TS22: eye Strong Regionally restricted Embryo_C1444_1_1C
TS22: retina Absent Embryo_C1444_1_1C
TS22: lens Strong Regionally restricted Embryo_C1444_1_1C
TS22: cornea Absent
TS22: optic nerve Absent
TS22: nose Strong Regionally restricted Embryo_C1444_1_4A
TS22: olfactory epithelium Strong Regionally restricted Embryo_C1444_1_4A
TS22: ear Strong Regionally restricted Embryo_C1444_1_3A
TS22: inner ear Moderate Regionally restricted Embryo_C1444_1_2C
TS22: cochlea Strong Regionally restricted Embryo_C1444_1_3A
TS22: inner ear labyrinth Absent
TS22: middle ear Strong Regionally restricted Embryo_C1444_1_2A
TS22: alimentary system Strong Regionally restricted Embryo_C1444_1_4B Expression was strong in the digestive system.
TS22: intestine Strong Regionally restricted Embryo_C1444_1_4A
TS22: salivary gland Strong Regionally restricted Embryo_C1444_1_2D
TS22: tongue Strong Regionally restricted Embryo_C1444_1_4B
TS22: tooth Strong Regionally restricted Embryo_C1444_1_4B
TS22: palatal shelf Strong Regionally restricted Embryo_C1444_1_4A
TS22: esophagus Moderate Regionally restricted Embryo_C1444_1_4B
TS22: stomach Strong Regionally restricted Embryo_C1444_1_6C
TS22: liver Strong Regionally restricted Embryo_C1444_1_3B
TS22: respiratory system Strong Regionally restricted Embryo_C1444_1_3A
TS22: pharynx Strong Regionally restricted Embryo_C1444_1_4B
TS22: larynx Strong Regionally restricted Embryo_C1444_1_4B
TS22: trachea Strong Regionally restricted Embryo_C1444_1_4A
TS22: main bronchus Strong Regionally restricted Embryo_C1444_1_3A
TS22: lung Strong Regionally restricted Embryo_C1444_1_2C
TS22: urinary system Strong Regionally restricted Embryo_C1444_1_4B Expression was strong in the genito-urinary system.
TS22: metanephros Strong Regionally restricted Embryo_C1444_1_3A
TS22: ureter Weak Regionally restricted Embryo_C1444_1_4B
TS22: bladder Strong Regionally restricted Embryo_C1444_1_4B
TS22: urethra Strong Regionally restricted Embryo_C1444_1_4B
TS22: reproductive system Strong Regionally restricted Embryo_C1444_1_4D
TS22: genital tubercle Strong Regionally restricted Embryo_C1444_1_4D
TS22: gonad Absent
TS22: gland Strong Regionally restricted Embryo_C1444_1_4D Expression was strong in the endocrine system.
TS22: thyroid gland Strong Regionally restricted Embryo_C1444_1_4D
TS22: pituitary gland Weak Regionally restricted Embryo_C1444_1_4C
TS22: pancreas Strong Regionally restricted Embryo_C1444_1_5A
TS22: adrenal gland Weak Regionally restricted Embryo_C1444_1_5B
TS22: cardiovascular system Weak Scattered Embryo_C1444_1_4B
TS22: heart Weak Scattered Embryo_C1444_1_4B
TS22: heart atrium Weak Scattered Embryo_C1444_1_4A
TS22: heart ventricle Weak Scattered Embryo_C1444_1_4B
TS22: blood vessel Absent Embryo_C1444_1_4C
TS22: hemolymphoid system Strong Regionally restricted Embryo_C1444_1_4C Expression was strong in the immune system.
TS22: spleen primordium Absent
TS22: thymus primordium Strong Regionally restricted Embryo_C1444_1_4C
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Absent
TS22: face Weak Regionally restricted Embryo_C1444_1_4D Expression was weak in the face/soft tissues.
TS22: facial bone primordium Absent
TS22: cranium Absent Expression was not detected in the skull (base and vault).
TS22: axial skeleton Absent
TS22: tail Strong Regionally restricted Embryo_C1444_1_4A
TS22: forelimb Strong Regionally restricted Embryo_C1444_1_1A
TS22: hindlimb Strong Regionally restricted Embryo_C1444_1_2B
TS22: integumental system Strong Regionally restricted Embryo_C1444_1_2B
TS22: skin Strong Regionally restricted Embryo_C1444_1_1B
TS22: hair Strong Regionally restricted Embryo_C1444_1_2B
TS22: vibrissa follicle Strong Regionally restricted Embryo_C1444_1_2B Expression was strong in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
Warranty Disclaimer, Privacy Notice, Licensing, & Copyright
Send questions and comments to User Support. 		last database update
06/12/2024
MGI 6.13 		The Jackson Laboratory