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Gene Expression Data
Assay Details
Assay
Reference: J:122989 Visel A, et al., GenePaint.org: an atlas of gene expression patterns in the mouse embryo. Nucleic Acids Res. 2004 Jan 1;32(Database issue):D552-6
Assay type: RNA in situ
MGI Accession ID: MGI:5423450
Gene symbol: Abcc5
Gene name: ATP-binding cassette, sub-family C member 5
Probe: EH4044 probe 3996
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Assay notes: Cryosections of fresh frozen material were fixed in 4% paraformaldehyde for 20 min. before further processing. A tyramide-biotin/streptavidin amplification step was included in the in situ hybridization procedure. These data were downloaded from GenePaint.org on 1/30/12.
Results
Specimen EH4044; Specimen C3674: embryonic day 14.5 (more )
Structure Level Pattern Image Note
TS22: nervous system Strong Regionally restricted Embryo_C3674_1_5C
TS22: central nervous system Strong Regionally restricted Embryo_C3674_1_4C
TS22: telencephalon Strong Regionally restricted Embryo_C3674_1_5A
TS22: cerebral cortex Strong Regionally restricted Embryo_C3674_1_5A
TS22: neocortex Strong Regionally restricted Embryo_C3674_1_5A
TS22: olfactory cortex Strong Regionally restricted Embryo_C3674_1_4D
TS22: main olfactory bulb Strong Regionally restricted Embryo_C3674_1_4D
TS22: piriform cortex Strong Regionally restricted Embryo_C3674_1_1A
TS22: hippocampus Moderate Regionally restricted Embryo_C3674_1_3B
TS22: basal ganglia Strong Regionally restricted Embryo_C3674_1_5A
TS22: corpus striatum Absent Expression was not detected in the corpus striatum (lateral ganglionic eminence).
TS22: basal forebrain Strong Regionally restricted Embryo_C3674_1_5A
TS22: amygdala Strong Ubiquitous Embryo_C3674_1_1D
TS22: telencephalon septum Moderate Regionally restricted Embryo_C3674_1_3B
TS22: pallidum Absent Expression was not detected in the pallidum (medial ganglionic eminence).
TS22: diencephalon Moderate Ubiquitous Embryo_C3674_1_4C
TS22: thalamus Moderate Ubiquitous Embryo_C3674_1_4C
TS22: hypothalamus Moderate Ubiquitous Embryo_C3674_1_4C
TS22: midbrain Strong Regionally restricted Embryo_C3674_1_4C
TS22: pretectum Moderate Regionally restricted Embryo_C3674_1_4C
TS22: superior colliculus Strong Regionally restricted Embryo_C3674_1_4C
TS22: inferior colliculus Absent
TS22: midbrain tegmentum Strong Regionally restricted Embryo_C3674_1_4C
TS22: hindbrain Strong Ubiquitous Embryo_C3674_1_4C
TS22: cerebellum Moderate Ubiquitous Embryo_C3674_1_4C
TS22: pons Strong Ubiquitous Embryo_C3674_1_4C
TS22: medulla oblongata Strong Ubiquitous Embryo_C3674_1_4C
TS22: spinal cord Strong Ubiquitous Embryo_C3674_1_3D
TS22: choroid plexus Absent
TS22: meninges Strong Regionally restricted Embryo_C3674_1_1D
TS22: peripheral nervous system Strong Ubiquitous Embryo_C3674_1_5C
TS22: cranial ganglion Strong Ubiquitous Embryo_C3674_1_2C
TS22: dorsal root ganglion Strong Ubiquitous Embryo_C3674_1_5C
TS22: eye Strong Regionally restricted Embryo_C3674_1_1A
TS22: retina Strong Regionally restricted Embryo_C3674_1_1A
TS22: lens Absent
TS22: cornea Absent
TS22: optic nerve Absent
TS22: nose Absent
TS22: olfactory epithelium Absent
TS22: ear Moderate Regionally restricted Embryo_C3674_1_2C
TS22: inner ear Moderate Regionally restricted Embryo_C3674_1_2C
TS22: cochlea Moderate Regionally restricted Embryo_C3674_1_3A
TS22: inner ear labyrinth Moderate Regionally restricted Embryo_C3674_1_2C
TS22: middle ear Absent
TS22: alimentary system Moderate Regionally restricted Embryo_C3674_1_4D Expression was detected in the digestive system.
TS22: intestine Moderate Regionally restricted Embryo_C3674_1_4D
TS22: salivary gland Absent
TS22: tongue Moderate Regionally restricted Embryo_C3674_1_4D
TS22: tooth Absent
TS22: palatal shelf Moderate Regionally restricted Embryo_C3674_1_4D
TS22: esophagus Absent
TS22: stomach Absent
TS22: liver Absent
TS22: respiratory system Weak Regionally restricted Embryo_C3674_1_3C
TS22: pharynx Absent
TS22: larynx Absent
TS22: trachea Absent
TS22: main bronchus Absent
TS22: lung Weak Regionally restricted Embryo_C3674_1_3C
TS22: urinary system Moderate Regionally restricted Embryo_C3674_1_2D Expression was detected in the genito-urinary system.
TS22: metanephros Weak Regionally restricted Embryo_C3674_1_3A
TS22: ureter Absent
TS22: bladder Absent
TS22: urethra Absent
TS22: reproductive system Moderate Regionally restricted Embryo_C3674_1_2D
TS22: genital tubercle Absent
TS22: gonad Moderate Regionally restricted Embryo_C3674_1_2D
TS22: gland Absent Expression was not detected in the endocrine system.
TS22: thyroid gland Absent
TS22: pituitary gland Absent
TS22: pancreas Absent
TS22: adrenal gland Absent
TS22: cardiovascular system Moderate Regionally restricted Embryo_C3674_1_4C
TS22: heart Moderate Regionally restricted Embryo_C3674_1_4C
TS22: heart atrium Moderate Regionally restricted Embryo_C3674_1_4C
TS22: heart ventricle Moderate Scattered Embryo_C3674_1_4C
TS22: blood vessel Absent
TS22: hemolymphoid system Absent Expression was not detected in the immune system.
TS22: spleen primordium Absent
TS22: thymus primordium Absent
TS22: appendicular skeleton Absent Expression was not detected in the skeleton (limbs, shoulder, hip).
TS22: musculature Absent
TS22: face Weak Regionally restricted Embryo_C3674_1_2D Expression was weak in the face/soft tissues.
TS22: facial bone primordium Absent
TS22: cranium Absent Expression was not detected in the skull (base and vault).
TS22: axial skeleton Absent
TS22: tail Absent
TS22: forelimb Strong Regionally restricted Embryo_C3674_1_1A
TS22: hindlimb Moderate Regionally restricted Embryo_C3674_1_1A
TS22: integumental system Absent
TS22: skin Absent
TS22: hair Absent
TS22: vibrissa follicle Absent Expression was not detected in whisker follicle.
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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09/17/2024
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