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Gene Expression Data
Assay Details
Assay
Reference: J:45549 Bellefroid EJ, et al., Xiro3 encodes a Xenopus homolog of the Drosophila Iroquois genes and functions in neural specification. EMBO J. 1998 Jan 2;17(1):191-203
Assay type: RNA in situ
MGI Accession ID: MGI:5438114
Gene symbol: Irx3
Gene name: Iroquois related homeobox 3
Probe: Irx3 cDNA6
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen 3A: embryonic day 7.5 (more )
Structure Level Pattern Image Note
TS11: extraembryonic ectoderm Present 3A

Specimen 3A': embryonic day 7.5 (more )
Structure Level Pattern Image Note
TS11: chorion ectoderm Present 3A'
TS11: embryo ectoderm Present 3A'
TS11: extraembryonic ectoderm Present 3A'

Specimen 3B: embryonic day 8.0 (more )
Structure Level Pattern Image Note
TS12: future hindbrain neural fold Strong 3B
TS12: future midbrain neural fold Strong 3B

Specimen 3B': embryonic day 8.0 (more )
Structure Level Pattern Image Note
TS12: future hindbrain neural fold Strong 3B'
TS12: future prosencephalon Absent 3B'

Specimen 3C: embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: future spinal cord Present Regionally restricted 3C Expression is present in the ventricular zone.

Specimen 3C': embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: future hindbrain Present 3C'
TS13: future midbrain Present 3C'
TS13: future spinal cord Present Regionally restricted 3C' Expression is present in the rostral part of the spinal cord.

Specimen 3C'': embryonic day 8.5 (more )
Structure Level Pattern Image Note
TS13: future hindbrain Present Regionally restricted 3C'' Expression is present in the ventricular zone, excluding the floor and roof plates.
TS13: future hindbrain floor plate Absent 3C''
TS13: head mesenchyme Present 3C'' Expression is present in cephalic mesodermal cells.

Specimen 3D: embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: future hindbrain Strong 3D
TS15: future midbrain Strong 3D
TS15: future spinal cord Strong 3D
TS15: 1st branchial arch ectoderm Strong 3D Authors reported strong expression in the ectodermal layer of the branchial arches.

Specimen 3D': embryonic day 9.5 (more )
Structure Level Pattern Image Note
TS15: future hindbrain Strong 3D'
TS15: head mesenchyme Present 3D' Expression is present in the cephalic mesoderm.
TS15: trunk mesenchyme Present Regionally restricted 3D' Expression is present in the lateral plate mesoderm.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
06/12/2024
MGI 6.13
The Jackson Laboratory