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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5538957
Gene symbol: Irx3
Gene name: Iroquois related homeobox 3
Probe: NIA clone H3010C07
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:8970: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: mesonephros of male Absent GUDMAP:8970
TS21: mesonephric mesenchyme of male Absent GUDMAP:8970
TS21: mesonephric tubule of male Absent GUDMAP:8970
TS21: cranial mesonephric tubule of male Absent GUDMAP:8970
TS21: mesonephric glomerulus of male Absent GUDMAP:8970
TS21: rest of cranial mesonephric tubule of male Absent GUDMAP:8970
TS21: caudal mesonephric tubule of male Absent GUDMAP:8970
TS21: nephric duct of male, mesonephric portion Absent GUDMAP:8970
TS21: paramesonephric duct of male, mesonephric portion Absent GUDMAP:8970
TS21: coelomic epithelium of male mesonephros Absent GUDMAP:8970
TS21: nephric duct of male, rest of Absent GUDMAP:8970
TS21: epithelium of nephric duct of male Absent GUDMAP:8970
TS21: mesenchyme of nephric duct of male Absent GUDMAP:8970
TS21: paramesonephric duct of male, rest of Absent GUDMAP:8970
TS21: epithelium of rest of paramesonephric duct of male Absent GUDMAP:8970
TS21: mesenchyme of rest of paramesonephric duct of male Absent GUDMAP:8970
TS21: testis Absent GUDMAP:8970
TS21: coelomic epithelium of testis Absent GUDMAP:8970
TS21: interstitium of the testis Absent GUDMAP:8970
TS21: primary sex cord Absent GUDMAP:8970
TS21: germ cell of testis Absent GUDMAP:8970
TS21: rete testis Absent GUDMAP:8970
TS21: developing vasculature of testis Absent GUDMAP:8970
TS21: coelomic vessel Absent GUDMAP:8970
TS21: interstitial vessel Absent GUDMAP:8970
TS21: developing vasculature of male mesonephros Absent GUDMAP:8970
Specimen GUDMAP:8971: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: female reproductive system Present Regionally restricted GUDMAP:8971
TS21: ovary Present Regionally restricted GUDMAP:8971
TS21: mesenchymal stroma of ovary Present GUDMAP:8971
TS21: mesonephros of female Absent GUDMAP:8971
TS21: mesonephric mesenchyme of female Absent GUDMAP:8971
TS21: mesonephric tubule of female Absent GUDMAP:8971
TS21: cranial mesonephric tubule of female Absent GUDMAP:8971
TS21: mesonephric glomerulus of female Absent GUDMAP:8971
TS21: rest of cranial mesonephric tubule of female Absent GUDMAP:8971
TS21: caudal mesonephric tubule of female Absent GUDMAP:8971
TS21: nephric duct of female, mesonephric portion Absent GUDMAP:8971
TS21: paramesonephric duct of female, mesonephric portion Absent GUDMAP:8971
TS21: coelomic epithelium of female mesonephros Absent GUDMAP:8971
TS21: nephric duct of female, rest of Absent GUDMAP:8971
TS21: epithelium of nephric duct of female Absent GUDMAP:8971
TS21: mesenchyme of nephric duct of female Absent GUDMAP:8971
TS21: paramesonephric duct of female, rest of Absent GUDMAP:8971
TS21: epithelium of rest of paramesonephric duct of female Absent GUDMAP:8971
TS21: mesenchyme of rest of paramesonephric duct of female Absent GUDMAP:8971
TS21: developing vasculature of female mesonephros Absent GUDMAP:8971
Specimen GUDMAP:8972: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP. Male and female were examined; only the male is shown. Annotators reported the female expression pattern in the metanephros is identical to male.
Structure Level Pattern Image Note
TS21: urogenital mesentery Absent GUDMAP:8972
TS21: metanephros Absent GUDMAP:8972
TS21: renal capsule Absent GUDMAP:8972
TS21: nephrogenic zone Absent GUDMAP:8972
TS21: nephrogenic interstitium Absent GUDMAP:8972
TS21: cap mesenchyme Absent GUDMAP:8972
TS21: pretubular aggregate Absent GUDMAP:8972
TS21: ureteric tip Absent GUDMAP:8972
TS21: ureteric tree terminal branch excluding tip itself Absent GUDMAP:8972
TS21: capillary loop renal corpuscle Absent GUDMAP:8972
TS21: renal tubule Absent GUDMAP:8972
TS21: renal interstitium Absent GUDMAP:8972
TS21: developing vasculature of metanephros Absent GUDMAP:8972
TS21: ureteric trunk Absent GUDMAP:8972
TS21: renal pelvis Absent GUDMAP:8972
TS21: renal artery Absent GUDMAP:8972
TS21: renal vein Absent GUDMAP:8972
TS21: ureter Absent GUDMAP:8972
TS21: urothelium of ureter Absent GUDMAP:8972
TS21: ureteral mesenchyme Absent GUDMAP:8972
TS21: primitive collecting duct Absent GUDMAP:8972
TS21: renal vasculature Absent GUDMAP:8972
TS21: early nephron Absent GUDMAP:8972
Specimen GUDMAP:8973: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP. Male and female were examined; only the male is shown. Annotators reported the female expression pattern in the lower urinary tract is identical to male.
Structure Level Pattern Image Note
TS21: ureter Absent GUDMAP:8973
TS21: urothelium of ureter Absent GUDMAP:8973
TS21: ureteral mesenchyme Absent GUDMAP:8973
TS21: ureteral mesenchyme subepithelial layer Absent GUDMAP:8973
TS21: ureteral mesenchyme middle layer Absent GUDMAP:8973
TS21: ureteral mesenchyme outer layer Absent GUDMAP:8973
TS21: ureteral vasculature Absent GUDMAP:8973
TS21: urogenital sinus Absent GUDMAP:8973
TS21: primitive bladder Absent GUDMAP:8973
TS21: urothelium of primitive bladder Absent GUDMAP:8973
TS21: mesenchymal layer of primitive bladder Absent GUDMAP:8973
TS21: developing vasculature of primitive bladder Absent GUDMAP:8973
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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06/12/2024
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