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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5541523
Gene symbol: Synpo2
Gene name: synaptopodin 2
Probe: RIKEN clone 1110069I04 subclone
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:9719: embryonic day 10.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS17: mesonephric tubule Absent GUDMAP:9719
TS17: nephric duct, mesonephric portion Absent GUDMAP:9719
TS17: nephric duct, metanephric portion Absent GUDMAP:9719
TS17: genitourinary system Ambiguous GUDMAP:9719
TS17: mesonephros Ambiguous GUDMAP:9719 expression possible
TS17: metanephric mesenchyme Ambiguous GUDMAP:9719 expression possible

Specimen GUDMAP:9720: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: paramesonephric duct of male, mesonephric portion Absent GUDMAP:9720
TS21: testis Ambiguous GUDMAP:9720 expression uncertain
TS21: mesonephros of male Ambiguous GUDMAP:9720 expression possible

Specimen GUDMAP:9721: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: urinary system Present Regionally restricted GUDMAP:9721
TS21: urogenital sinus Present Regionally restricted GUDMAP:9721
TS21: primitive bladder Present GUDMAP:9721

Specimen GUDMAP:9722: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP.
Structure Level Pattern Image Note
TS21: paramesonephric duct of female, mesonephric portion Absent GUDMAP:9722
TS21: mesonephros of female Ambiguous GUDMAP:9722 expression possible

Specimen GUDMAP:9723: embryonic day 13.5 (more )
Note: Labeling was visualized using NBT/BCIP. Male and female were examined; only the female is shown. Annotators reported the male expression pattern in the metanephros is identical to female.
Structure Level Pattern Image Note
TS21: urinary system Ambiguous GUDMAP:9723
TS21: metanephros Ambiguous GUDMAP:9723

Specimen GUDMAP:9750: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: urinary system Present GUDMAP:9750
TS23: metanephros Present Regionally restricted GUDMAP:9750
TS23: renal medulla Present Regionally restricted GUDMAP:9750
TS23: renal medullary interstitium Present GUDMAP:9750
TS23: renal pelvis Present Regionally restricted GUDMAP:9750
TS23: pelvic smooth muscle Present GUDMAP:9750
TS23: ureter Present Regionally restricted GUDMAP:9750
TS23: ureteral mesenchyme Present GUDMAP:9750
TS23: ureteral smooth muscle layer Present GUDMAP:9750
TS23: nephrogenic zone Absent GUDMAP:9750
TS23: renal vesicle Absent GUDMAP:9750
TS23: comma-shaped body Absent GUDMAP:9750
TS23: s-shaped body Absent GUDMAP:9750
TS23: capillary loop renal corpuscle Absent GUDMAP:9750
TS23: maturing renal corpuscle Absent GUDMAP:9750
TS23: cortical renal tubule Absent GUDMAP:9750
TS23: cortical collecting duct Absent GUDMAP:9750
TS23: renal cortical vasculature Absent GUDMAP:9750
TS23: renal medullary vasculature Absent GUDMAP:9750
TS23: medullary collecting duct Absent GUDMAP:9750
TS23: pelvic urothelial lining Absent GUDMAP:9750
TS23: urothelium of ureter Absent GUDMAP:9750
TS23: ureteral mesenchyme outer layer Absent GUDMAP:9750
TS23: renal cortex Ambiguous GUDMAP:9750
TS23: renal cortical interstitium Ambiguous GUDMAP:9750 possible very weak expression adjacent to the renal medulla
TS23: immature loop of Henle Ambiguous GUDMAP:9750 weak signal detected which may be background staining
TS23: perihilar interstitium Ambiguous GUDMAP:9750 possible very weak expression

Specimen GUDMAP:9751: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: ureter Present Regionally restricted GUDMAP:9751
TS23: ureteral mesenchyme Present GUDMAP:9751
TS23: ureteral smooth muscle layer Present GUDMAP:9751
TS23: urothelium of ureter Absent GUDMAP:9751
TS23: ureteral mesenchyme outer layer Absent GUDMAP:9751

Specimen GUDMAP:9752: postnatal adult (more )
Note: This animal was sexually mature. Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS28: metanephros Absent GUDMAP:9752
TS28: ureter Absent GUDMAP:9752

Specimen GUDMAP:9753: postnatal adult (more )
Note: This animal was sexually mature. Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS28: ureter Absent GUDMAP:9753


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Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
09/17/2024
MGI 6.24
The Jackson Laboratory