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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5541579
Gene symbol: Aldh1l1
Gene name: aldehyde dehydrogenase 1 family, member L1
Probe: RIKEN clone B230119O16 subclone
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:11024: postnatal adult (more )
Note: This animal was sexually mature. Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS28: renal distal tubule Present GUDMAP:11024 Regional expression likely restricted to distal convoluted tubules due to their location adjacent to veins in the renal cortex. No obvious strong expression in distal straight tubules of the cortex.
TS28: distal convoluted tubule Present Regionally restricted GUDMAP:11024 Expression in a small subset of distal tubules likely distal convoluted tubules due to their location adjacent to veins.
TS28: segment 1 of proximal tubule Absent GUDMAP:11024
TS28: renal cortical interstitium Absent GUDMAP:11024
TS28: renal cortical vasculature Absent GUDMAP:11024
TS28: mature renal corpuscle Absent GUDMAP:11024
TS28: cortical renal tubule Present GUDMAP:11024
TS28: renal cortex Present GUDMAP:11024
TS28: metanephros Present GUDMAP:11024
TS28: renal medulla Present GUDMAP:11024
TS28: outer renal medulla Present GUDMAP:11024
TS28: renal proximal tubule Present GUDMAP:11024
TS28: proximal straight tubule, cortical portion Present GUDMAP:11024
TS28: loop of Henle, outer medullary portion Present GUDMAP:11024
TS28: proximal straight tubule, outer medullary portion Present GUDMAP:11024
TS28: segment 2 of proximal tubule Present Regionally restricted GUDMAP:11024 distal expression; Weaker expression, possibly in a subset of segment 2 tubules, most likely adjacent to the renal proximal straight tubule, ie. segment 3 tubules.
TS28: renal proximal convoluted tubule Present GUDMAP:11024
TS28: distal straight tubule of renal cortex Ambiguous GUDMAP:11024 There is no obvious expression in distal straight tubules of the cortex, but there may be some weak expression in a subset of this tubular segment of some nephrons.
TS28: renal connecting tubule Absent GUDMAP:11024
TS28: cortical collecting duct Absent GUDMAP:11024
TS28: thin descending limb of outer medulla Absent GUDMAP:11024
TS28: thin ascending limb of outer medulla Absent GUDMAP:11024
TS28: outer medullary interstitium Absent GUDMAP:11024
TS28: outer medullary collecting duct Absent GUDMAP:11024
TS28: inner renal medulla Absent GUDMAP:11024
TS28: renal medullary vasculature Absent GUDMAP:11024
TS28: outer stripe of outer medulla Present GUDMAP:11024
TS28: inner stripe of outer medulla Present GUDMAP:11024
TS28: loop of Henle of outer stripe of outer medulla Present GUDMAP:11024
TS28: loop of Henle of inner stripe of outer medulla Present GUDMAP:11024
TS28: proximal straight tubule of outer stripe of outer medulla Present GUDMAP:11024
TS28: distal straight tubule of outer stripe of outer medulla Present Regionally restricted GUDMAP:11024 Expression observed in a subset of distal straight tubules.
TS28: premacula segment of distal straight tubule of inner stripe of inner medulla Present Regionally restricted GUDMAP:11024 Expression observed in a subset of distal straight tubules.
TS28: thin descending limb of inner stripe of outer medulla Absent GUDMAP:11024
TS28: premacula segment of distal straight tubule of outer medulla Present Regionally restricted GUDMAP:11024 Expression observed in a subset of distal straight tubules.
TS28: urinary system Present GUDMAP:11024
TS28: renal pelvis Absent GUDMAP:11024
TS28: inner medullary interstitium Absent GUDMAP:11024
Specimen GUDMAP:13954: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: metanephros Present GUDMAP:13954
TS23: renal cortex Present GUDMAP:13954
TS23: cortical renal tubule Present GUDMAP:13954
TS23: cortical early proximal tubule Present GUDMAP:13954
TS23: cortical early distal tubule Present GUDMAP:13954
TS23: early proximal tubule of maturing nephron Present GUDMAP:13954
TS23: early distal tubule of maturing nephron Present GUDMAP:13954
TS23: cortical renal tubule of maturing nephron group Present GUDMAP:13954
TS23: anlage of loop of Henle of cortical renal tubule Absent GUDMAP:13954
TS23: early proximal tubule of capillary loop nephron Absent GUDMAP:13954
TS23: early distal tubule of capillary loop nephron Absent GUDMAP:13954
TS23: renal connecting tubule Absent GUDMAP:13954
TS23: cortical renal tubule of capillary loop nephron group Absent GUDMAP:13954
TS23: renal connecting tubule of maturing nephron Absent GUDMAP:13954
TS23: renal connecting tubule of capillary loop nephron Absent GUDMAP:13954
TS23: maturing renal corpuscle Absent GUDMAP:13954
TS23: capillary loop renal corpuscle Absent GUDMAP:13954
TS23: s-shaped body Absent GUDMAP:13954
TS23: comma-shaped body Absent GUDMAP:13954
TS23: renal vesicle Absent GUDMAP:13954
TS23: nephrogenic interstitium Absent GUDMAP:13954
TS23: cap mesenchyme Absent GUDMAP:13954
TS23: pretubular aggregate Absent GUDMAP:13954
TS23: ureteric tip Absent GUDMAP:13954
TS23: ureteric tree terminal branch excluding tip itself Absent GUDMAP:13954
TS23: cortical collecting duct Absent GUDMAP:13954
TS23: renal cortical interstitium Absent GUDMAP:13954
TS23: renal cortical vasculature Absent GUDMAP:13954
TS23: renal pelvis Absent GUDMAP:13954
TS23: pelvic urothelial lining Absent GUDMAP:13954
TS23: pelvic smooth muscle Absent GUDMAP:13954
TS23: perihilar interstitium Absent GUDMAP:13954
TS23: medullary collecting duct Absent GUDMAP:13954
TS23: renal medullary vasculature Absent GUDMAP:13954
TS23: renal medullary interstitium Absent GUDMAP:13954
TS23: nephrogenic zone Absent GUDMAP:13954
TS23: ureter Absent GUDMAP:13954
TS23: urothelium of ureter Absent GUDMAP:13954
TS23: ureteral mesenchyme Absent GUDMAP:13954
TS23: immature loop of Henle Present GUDMAP:13954
TS23: renal medulla Present GUDMAP:13954
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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12/10/2024
MGI 6.24 		The Jackson Laboratory