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Gene Expression Data
Assay Details
Assay
Reference: J:171409 GUDMAP Consortium, GUDMAP: the GenitoUrinary Development Molecular Anatomy Project. www.gudmap.org. 2004;
Assay type: RNA in situ
MGI Accession ID: MGI:5542023
Gene symbol: Sox7
Gene name: SRY (sex determining region Y)-box 7
Probe: RIKEN clone F830027G04 subclone
Probe preparation: Antisense labelled with digoxigenin RNA
Visualized with: Alkaline phosphatase
Results
Specimen GUDMAP:12564: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: cap mesenchyme Absent GUDMAP:12564
TS23: nephrogenic zone Present GUDMAP:12564
TS23: metanephros Present GUDMAP:12564 Expression in vasculature and within the interstitium in single cells or small groups of cells often found associated with red blood cells which may indicate expression in early developing capillaries/endothelial cell precursors.
TS23: urinary system Present GUDMAP:12564
TS23: renal cortex Present GUDMAP:12564
TS23: renal medulla Present GUDMAP:12564
TS23: renal cortical interstitium Ambiguous GUDMAP:12564 Expression small subset of interstitial cells most commonly found associated with red blood cells may be either renal cortical capillaries or early capillaries/endothelial cell precursors.
TS23: renal medullary interstitium Absent GUDMAP:12564
TS23: maturing renal corpuscle Present GUDMAP:12564
TS23: capillary loop renal corpuscle Present GUDMAP:12564
TS23: nephrogenic interstitium Present Regionally restricted GUDMAP:12564 Expression in small subset of nephrogenic interstitial cells associated with red blood cells - possibly in early developing capillaries.
TS23: ureteric tip Absent GUDMAP:12564
TS23: ureteric tree terminal branch excluding tip itself Absent GUDMAP:12564
TS23: cortical collecting duct Absent GUDMAP:12564
TS23: s-shaped body Present Spotted GUDMAP:12564 single cell expression; Expression detected only in cleft of S-shaped body possibly in the very early developing capillaries.
TS23: renal connecting tubule of s-shaped body Absent GUDMAP:12564
TS23: distal segment of s-shaped body Absent GUDMAP:12564
TS23: medial segment of s-shaped body Absent GUDMAP:12564
TS23: proximal segment of s-shaped body Absent GUDMAP:12564
TS23: presumptive endothelium of capillary loop renal corpuscle Present GUDMAP:12564
TS23: maturing glomerular tuft Present GUDMAP:12564
TS23: glomerular capillary system of maturing glomerular tuft Present GUDMAP:12564 Expression appears to be associated with capillaries, but is not detected in the endothelial cells of the capillaries themselves.
TS23: parietal epithelium of capillary loop renal corpuscle Absent GUDMAP:12564
TS23: presumptive mesangium of capillary loop renal corpuscle Absent GUDMAP:12564
TS23: visceral epithelium of capillary loop renal corpuscle Absent GUDMAP:12564
TS23: glomerular mesangium of maturing glomerular tuft Absent GUDMAP:12564
TS23: visceral epithelium of maturing renal corpuscle Absent GUDMAP:12564
TS23: glomerular basement membrane of maturing renal corpuscle Absent GUDMAP:12564
TS23: comma-shaped body Absent GUDMAP:12564
TS23: renal vesicle Absent GUDMAP:12564
TS23: renal cortical capillary Present GUDMAP:12564 Expression appears to be associated with capillaries, but is not detected in the endothelial cells of the capillaries themselves.
TS23: renal cortical vasculature Present GUDMAP:12564
TS23: renal medullary vasculature Present GUDMAP:12564
TS23: renal medullary capillary Present GUDMAP:12564 Expression appears to be associated with capillaries, but is not detected in the endothelial cells of the capillaries themselves.
TS23: cortical renal tubule Absent GUDMAP:12564
TS23: renal cortical venous system Present GUDMAP:12564
TS23: renal cortical arterial system Present Regionally restricted GUDMAP:12564 Expression restricted to endothelial cells of arteries.
TS23: renal medullary arterial system Present GUDMAP:12564
TS23: renal medullary venous system Present GUDMAP:12564
TS23: immature loop of Henle Absent GUDMAP:12564
TS23: pelvic smooth muscle Absent GUDMAP:12564
TS23: perihilar interstitium Absent GUDMAP:12564
TS23: early tubule Present GUDMAP:12564
TS23: developing capillary loop stage nephron group Present GUDMAP:12564
TS23: maturing nephron Present GUDMAP:12564
TS23: late tubule Present GUDMAP:12564
TS23: medullary collecting duct Absent GUDMAP:12564
TS23: pelvic urothelial lining Absent GUDMAP:12564
TS23: renal pelvis Absent GUDMAP:12564
TS23: collecting duct Present GUDMAP:12564
TS23: ureteric trunk Present GUDMAP:12564
TS23: renal interstitium Present GUDMAP:12564
TS23: ureter Present GUDMAP:12564
TS23: renal small blood vessel Present GUDMAP:12564
TS23: renal capillary Present GUDMAP:12564
TS23: ureteral vasculature Present GUDMAP:12564 Expression appears to be associated with capillaries, but is not detected in the endothelial cells of the capillaries themselves.
TS23: ureteral mesenchyme Absent GUDMAP:12564
TS23: urothelium of ureter Absent GUDMAP:12564
TS23: renal vasculature Present GUDMAP:12564
TS23: pretubular aggregate Absent GUDMAP:12564
TS23: Bowman's capsule of maturing renal corpuscle Absent GUDMAP:12564
TS23: juxtaglomerular arteriole Present GUDMAP:12564
TS23: developing vasculature of urinary system Present GUDMAP:12564
Specimen GUDMAP:12565: embryonic day 15.5 (more )
Note: Labeling was visualized using BM purple.
Structure Level Pattern Image Note
TS23: ureteral vasculature Present GUDMAP:12565
TS23: ureter Present GUDMAP:12565
TS23: urinary system Present GUDMAP:12565
TS23: urothelium of ureter Absent GUDMAP:12565
TS23: ureteral mesenchyme Absent GUDMAP:12565
TS23: developing vasculature of urinary system Present GUDMAP:12565
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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09/17/2024
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